RALGDS report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	14 studies	26% ± 8%	Explore
astrocyte	12 studies	27% ± 12%	Explore
oligodendrocyte	12 studies	33% ± 12%	Explore
endothelial cell of lymphatic vessel	11 studies	23% ± 7%	Explore
ciliated cell	10 studies	26% ± 16%	Explore
macrophage	8 studies	20% ± 4%	Explore
natural killer cell	6 studies	18% ± 3%	Explore
CD16-positive, CD56-dim natural killer cell, human	5 studies	19% ± 2%	Explore
neuron	5 studies	34% ± 15%	Explore
glutamatergic neuron	5 studies	41% ± 21%	Explore
interneuron	5 studies	27% ± 17%	Explore
epithelial cell	5 studies	32% ± 13%	Explore
GABAergic neuron	5 studies	33% ± 15%	Explore
oligodendrocyte precursor cell	5 studies	35% ± 8%	Explore
CD16-negative, CD56-bright natural killer cell, human	4 studies	18% ± 3%	Explore
vein endothelial cell	4 studies	18% ± 1%	Explore
endothelial cell of vascular tree	4 studies	30% ± 11%	Explore
secretory cell	4 studies	19% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	21% ± 3%	Explore
CD8-positive, alpha-beta T cell	3 studies	19% ± 2%	Explore
myeloid cell	3 studies	23% ± 5%	Explore
lymphocyte	3 studies	19% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	20% ± 4%	Explore
gamma-delta T cell	3 studies	23% ± 6%	Explore
regulatory T cell	3 studies	17% ± 2%	Explore
basal cell	3 studies	27% ± 5%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	11 studies	30% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	7458.42	1445 / 1445	100%	6.66	183 / 183
prostate	100%	7564.58	245 / 245	100%	4.61	502 / 502
brain	100%	12379.19	2641 / 2642	100%	11.01	704 / 705
intestine	100%	7089.21	966 / 966	100%	4.32	526 / 527
bladder	100%	5638.14	21 / 21	100%	4.77	503 / 504
uterus	100%	5550.82	170 / 170	100%	5.90	458 / 459
adrenal gland	100%	8350.93	258 / 258	100%	11.84	229 / 230
ovary	100%	7179.97	180 / 180	99%	3.59	427 / 430
stomach	100%	4704.69	358 / 359	99%	4.01	284 / 286
breast	100%	10258.58	459 / 459	99%	4.56	1106 / 1118
lung	100%	10264.31	578 / 578	99%	4.47	1142 / 1155
thymus	100%	7473.22	652 / 653	99%	3.65	599 / 605
pancreas	98%	3689.43	321 / 328	99%	5.28	176 / 178
skin	96%	11259.51	1732 / 1809	99%	3.94	469 / 472
kidney	98%	3792.06	87 / 89	90%	2.86	807 / 901
adipose	100%	8979.92	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	6.99	29 / 29
spleen	100%	7321.18	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	4.96	45 / 45
ureter	0%	0	0 / 0	100%	3.59	1 / 1
eye	0%	0	0 / 0	99%	3.36	79 / 80
heart	97%	3877.24	836 / 861	0%	0	0 / 0
blood vessel	96%	3254.28	1275 / 1335	0%	0	0 / 0
muscle	95%	4016.62	764 / 803	0%	0	0 / 0
liver	26%	1242.13	58 / 226	60%	1.31	244 / 406
peripheral blood	74%	5200.60	687 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0