Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 27 studies | 33% ± 15% | |
| smooth muscle cell | 19 studies | 30% ± 12% | |
| pericyte | 17 studies | 31% ± 16% | |
| astrocyte | 15 studies | 41% ± 21% | |
| oligodendrocyte | 13 studies | 39% ± 14% | |
| glutamatergic neuron | 12 studies | 51% ± 26% | |
| macrophage | 12 studies | 32% ± 14% | |
| fibroblast | 12 studies | 27% ± 10% | |
| GABAergic neuron | 11 studies | 43% ± 24% | |
| microglial cell | 11 studies | 31% ± 10% | |
| oligodendrocyte precursor cell | 10 studies | 39% ± 15% | |
| epithelial cell | 9 studies | 37% ± 20% | |
| basal cell | 9 studies | 36% ± 20% | |
| adipocyte | 9 studies | 30% ± 9% | |
| neuron | 7 studies | 40% ± 16% | |
| myeloid cell | 7 studies | 24% ± 5% | |
| ciliated cell | 7 studies | 27% ± 10% | |
| interneuron | 6 studies | 52% ± 24% | |
| myofibroblast cell | 6 studies | 29% ± 14% | |
| club cell | 6 studies | 34% ± 14% | |
| dendritic cell | 6 studies | 22% ± 3% | |
| endothelial cell of lymphatic vessel | 6 studies | 38% ± 12% | |
| type I pneumocyte | 6 studies | 30% ± 11% | |
| type II pneumocyte | 6 studies | 33% ± 12% | |
| retinal ganglion cell | 5 studies | 27% ± 13% | |
| B cell | 5 studies | 21% ± 6% | |
| amacrine cell | 5 studies | 30% ± 9% | |
| retina horizontal cell | 5 studies | 22% ± 6% | |
| Mueller cell | 5 studies | 27% ± 9% | |
| monocyte | 5 studies | 28% ± 8% | |
| granule cell | 4 studies | 30% ± 8% | |
| cardiac muscle cell | 4 studies | 25% ± 1% | |
| mesothelial cell | 4 studies | 34% ± 11% | |
| lymphocyte | 4 studies | 22% ± 9% | |
| respiratory goblet cell | 4 studies | 38% ± 19% | |
| endothelial cell of vascular tree | 4 studies | 38% ± 19% | |
| GABAergic interneuron | 3 studies | 38% ± 1% | |
| glial cell | 3 studies | 24% ± 9% | |
| plasma cell | 3 studies | 21% ± 4% | |
| endothelial cell of artery | 3 studies | 21% ± 5% | |
| vein endothelial cell | 3 studies | 34% ± 21% | |
| GABAergic amacrine cell | 3 studies | 31% ± 10% | |
| glycinergic amacrine cell | 3 studies | 25% ± 4% | |
| retinal rod cell | 3 studies | 21% ± 1% | |
| secretory cell | 3 studies | 20% ± 2% | |
| hepatocyte | 3 studies | 39% ± 12% | |
| retinal pigment epithelial cell | 3 studies | 34% ± 23% | |
| muscle cell | 3 studies | 38% ± 28% | |
| connective tissue cell | 3 studies | 27% ± 6% | |
| ependymal cell | 3 studies | 42% ± 16% | |
| T cell | 3 studies | 22% ± 2% | |
| alveolar macrophage | 3 studies | 32% ± 10% | |
| capillary endothelial cell | 3 studies | 24% ± 4% | |
| goblet cell | 3 studies | 40% ± 32% | |
| transit amplifying cell | 3 studies | 39% ± 31% | |
| mucus secreting cell | 3 studies | 36% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 5401.66 | 2642 / 2642 | 100% | 59.89 | 705 / 705 |
| esophagus | 100% | 7437.48 | 1445 / 1445 | 100% | 32.16 | 183 / 183 |
| prostate | 100% | 5724.04 | 245 / 245 | 100% | 41.29 | 502 / 502 |
| breast | 100% | 5093.88 | 459 / 459 | 100% | 39.42 | 1116 / 1118 |
| uterus | 100% | 6348.86 | 170 / 170 | 100% | 33.63 | 458 / 459 |
| thymus | 100% | 7566.70 | 653 / 653 | 100% | 42.97 | 603 / 605 |
| stomach | 100% | 4610.24 | 359 / 359 | 99% | 23.40 | 284 / 286 |
| lung | 99% | 4129.93 | 574 / 578 | 100% | 27.41 | 1153 / 1155 |
| intestine | 100% | 7634.19 | 966 / 966 | 99% | 24.42 | 522 / 527 |
| bladder | 100% | 6527.05 | 21 / 21 | 99% | 24.68 | 498 / 504 |
| ovary | 100% | 4928.41 | 180 / 180 | 98% | 19.73 | 421 / 430 |
| kidney | 100% | 2839.99 | 89 / 89 | 98% | 23.93 | 880 / 901 |
| pancreas | 98% | 2111.87 | 320 / 328 | 99% | 26.40 | 177 / 178 |
| skin | 100% | 5824.19 | 1809 / 1809 | 96% | 20.70 | 452 / 472 |
| adrenal gland | 100% | 3293.68 | 258 / 258 | 96% | 24.72 | 220 / 230 |
| liver | 76% | 1027.11 | 172 / 226 | 73% | 9.19 | 296 / 406 |
| adipose | 100% | 5190.25 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 10180.80 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 21.22 | 29 / 29 |
| spleen | 100% | 3637.72 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 34.95 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 14.98 | 1 / 1 |
| muscle | 100% | 4253.41 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 94% | 2962.71 | 813 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 88% | 15.30 | 70 / 80 |
| peripheral blood | 41% | 1088.30 | 384 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0043087 | Biological process | regulation of GTPase activity |
| GO_1902017 | Biological process | regulation of cilium assembly |
| GO_0005813 | Cellular component | centrosome |
| GO_0005829 | Cellular component | cytosol |
| GO_0005875 | Cellular component | microtubule associated complex |
| GO_0005515 | Molecular function | protein binding |
| GO_0031267 | Molecular function | small GTPase binding |
| GO_0005096 | Molecular function | GTPase activator activity |
| GO_0015631 | Molecular function | tubulin binding |
| Gene name | RABGAP1 |
| Protein name | Rab GTPase-activating protein 1 (GAP and centrosome-associated protein) (Rab6 GTPase-activating protein GAPCenA) G protein-coupled receptor 21 (Rab GTPase-activating protein 1) RAB GTPase activating protein 1 |
| Synonyms | HSPC094 |
| Description | FUNCTION: May act as a GTPase-activating protein of RAB6A. May play a role in microtubule nucleation by centrosome. May participate in a RAB6A-mediated pathway involved in the metaphase-anaphase transition. . |
| Accessions | ENST00000373647.9 [Q9Y3P9-1] C9JGR5 B5MCD9 ENST00000616002 ENST00000402311.5 ENST00000426918.2 H9NIL4 ENST00000456584.5 [Q9Y3P9-2] Q9Y3P9 |