PPL report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
type I pneumocyte	10 studies	24% ± 5%	Explore
basal cell	10 studies	32% ± 17%	Explore
ciliated cell	9 studies	21% ± 6%	Explore
epithelial cell	6 studies	45% ± 18%	Explore
respiratory goblet cell	5 studies	30% ± 10%	Explore
club cell	5 studies	24% ± 7%	Explore
squamous epithelial cell	4 studies	75% ± 14%	Explore
hillock cell	3 studies	29% ± 10%	Explore
ionocyte	3 studies	20% ± 6%	Explore
secretory cell	3 studies	33% ± 15%	Explore
glutamatergic neuron	3 studies	25% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
esophagus	3 studies	34% ± 13%	Explore
brain	3 studies	21% ± 5%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	93%	7206.16	609 / 653	90%	136.69	542 / 605
esophagus	84%	75366.70	1221 / 1445	95%	201.93	174 / 183
breast	95%	13238.63	434 / 459	83%	33.77	928 / 1118
prostate	73%	5005.79	180 / 245	95%	45.38	475 / 502
lung	70%	5471.14	405 / 578	90%	64.94	1041 / 1155
bladder	76%	6155.90	16 / 21	82%	56.42	412 / 504
uterus	26%	3015.87	44 / 170	86%	104.31	393 / 459
skin	87%	38881.47	1570 / 1809	20%	11.70	96 / 472
ureter	0%	0	0 / 0	100%	68.22	1 / 1
intestine	30%	1817.25	291 / 966	69%	33.70	365 / 527
pancreas	3%	178.56	10 / 328	93%	73.49	166 / 178
tonsil	0%	0	0 / 0	96%	165.42	43 / 45
ovary	6%	301.27	11 / 180	87%	47.96	374 / 430
stomach	19%	1372.24	70 / 359	67%	23.45	191 / 286
adipose	81%	12320.98	977 / 1204	0%	0	0 / 0
kidney	20%	969.37	18 / 89	55%	23.39	500 / 901
liver	7%	319.31	16 / 226	28%	9.89	115 / 406
blood vessel	25%	1569.03	331 / 1335	0%	0	0 / 0
muscle	17%	962.14	134 / 803	0%	0	0 / 0
adrenal gland	4%	179.81	10 / 258	10%	3.99	23 / 230
brain	4%	182.60	102 / 2642	9%	2.01	60 / 705
heart	1%	64.41	11 / 861	0%	0	0 / 0
peripheral blood	0%	4.40	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0