Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 5645.81 | 180 / 180 | 100% | 177.29 | 430 / 430 |
brain | 100% | 5807.12 | 2639 / 2642 | 100% | 168.99 | 705 / 705 |
thymus | 100% | 6615.28 | 653 / 653 | 100% | 108.01 | 604 / 605 |
kidney | 100% | 6018.91 | 89 / 89 | 99% | 118.35 | 895 / 901 |
adrenal gland | 100% | 6644.78 | 258 / 258 | 99% | 147.84 | 228 / 230 |
prostate | 100% | 7171.76 | 244 / 245 | 99% | 157.00 | 499 / 502 |
pancreas | 100% | 4504.63 | 328 / 328 | 98% | 118.48 | 175 / 178 |
breast | 100% | 7646.97 | 459 / 459 | 97% | 109.22 | 1089 / 1118 |
lung | 100% | 11332.03 | 578 / 578 | 97% | 86.74 | 1117 / 1155 |
intestine | 100% | 8209.72 | 964 / 966 | 96% | 69.89 | 505 / 527 |
stomach | 100% | 6314.25 | 359 / 359 | 94% | 73.24 | 269 / 286 |
bladder | 100% | 9025.76 | 21 / 21 | 92% | 76.44 | 463 / 504 |
uterus | 100% | 9188.54 | 170 / 170 | 89% | 98.82 | 408 / 459 |
skin | 89% | 4181.10 | 1609 / 1809 | 99% | 187.02 | 469 / 472 |
liver | 88% | 2000.50 | 199 / 226 | 93% | 81.14 | 376 / 406 |
esophagus | 91% | 6830.95 | 1321 / 1445 | 86% | 55.44 | 157 / 183 |
adipose | 100% | 8789.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 201.58 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 235.77 | 29 / 29 |
spleen | 100% | 14122.19 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 66.97 | 1 / 1 |
blood vessel | 100% | 7410.91 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 7460.46 | 860 / 861 | 0% | 0 | 0 / 0 |
muscle | 100% | 6802.37 | 802 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 10341.24 | 923 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 52.41 | 39 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018105 | Biological process | peptidyl-serine phosphorylation |
GO_0003014 | Biological process | renal system process |
GO_0001783 | Biological process | B cell apoptotic process |
GO_0010631 | Biological process | epithelial cell migration |
GO_0002634 | Biological process | regulation of germinal center formation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0007165 | Biological process | signal transduction |
GO_0001782 | Biological process | B cell homeostasis |
GO_0002637 | Biological process | regulation of immunoglobulin production |
GO_0043687 | Biological process | post-translational protein modification |
GO_0006338 | Biological process | chromatin remodeling |
GO_0048536 | Biological process | spleen development |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_0006972 | Biological process | hyperosmotic response |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_2000145 | Biological process | regulation of cell motility |
GO_0060765 | Biological process | regulation of androgen receptor signaling pathway |
GO_0006468 | Biological process | protein phosphorylation |
GO_0030889 | Biological process | negative regulation of B cell proliferation |
GO_0030496 | Cellular component | midbody |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0032154 | Cellular component | cleavage furrow |
GO_0005768 | Cellular component | endosome |
GO_0005634 | Cellular component | nucleus |
GO_0005080 | Molecular function | protein kinase C binding |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0042393 | Molecular function | histone binding |
GO_0003682 | Molecular function | chromatin binding |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0031267 | Molecular function | small GTPase binding |
GO_0004672 | Molecular function | protein kinase activity |
GO_0005524 | Molecular function | ATP binding |
GO_0050681 | Molecular function | nuclear androgen receptor binding |
GO_0004697 | Molecular function | diacylglycerol-dependent serine/threonine kinase activity |
GO_0030374 | Molecular function | nuclear receptor coactivator activity |
GO_0005515 | Molecular function | protein binding |
GO_0035402 | Molecular function | histone H3T11 kinase activity |
GO_0042826 | Molecular function | histone deacetylase binding |
Gene name | PKN1 |
Protein name | Serine/threonine-protein kinase N1 (EC 2.7.11.13) (Protease-activated kinase 1) (PAK-1) (Protein kinase C-like 1) (Protein kinase C-like PKN) (Protein kinase PKN-alpha) (Protein-kinase C-related kinase 1) (Serine-threonine protein kinase N) Protein kinase N1 |
Synonyms | PAK1 PRKCL1 PKN PRK1 |
Description | FUNCTION: PKC-related serine/threonine-protein kinase involved in various processes such as regulation of the intermediate filaments of the actin cytoskeleton, cell migration, tumor cell invasion and transcription regulation. Part of a signaling cascade that begins with the activation of the adrenergic receptor ADRA1B and leads to the activation of MAPK14. Regulates the cytoskeletal network by phosphorylating proteins such as VIM and neurofilament proteins NEFH, NEFL and NEFM, leading to inhibit their polymerization. Phosphorylates 'Ser-575', 'Ser-637' and 'Ser-669' of MAPT/Tau, lowering its ability to bind to microtubules, resulting in disruption of tubulin assembly. Acts as a key coactivator of androgen receptor (AR)-dependent transcription, by being recruited to AR target genes and specifically mediating phosphorylation of 'Thr-11' of histone H3 (H3T11ph), a specific tag for epigenetic transcriptional activation that promotes demethylation of histone H3 'Lys-9' (H3K9me) by KDM4C/JMJD2C. Phosphorylates HDAC5, HDAC7 and HDAC9, leading to impair their import in the nucleus. Phosphorylates 'Thr-38' of PPP1R14A, 'Ser-159', 'Ser-163' and 'Ser-170' of MARCKS, and GFAP. Able to phosphorylate RPS6 in vitro. . |
Accessions | K7EKY9 Q16512 ENST00000342216.8 [Q16512-2] ENST00000242783.11 [Q16512-1] K7EPK3 K7ES10 ENST00000586557.5 ENST00000586237.1 K7EN76 ENST00000591461.1 ENST00000585619.5 ENST00000592960.1 K7EL10 K7EM57 ENST00000590097.5 |