Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell of lymphatic vessel | 20 studies | 46% ± 20% | |
smooth muscle cell | 16 studies | 26% ± 9% | |
endothelial cell | 12 studies | 25% ± 8% | |
microglial cell | 8 studies | 30% ± 15% | |
myofibroblast cell | 6 studies | 26% ± 13% | |
pericyte | 6 studies | 25% ± 7% | |
cardiac muscle cell | 5 studies | 43% ± 7% | |
vein endothelial cell | 3 studies | 40% ± 19% | |
rod bipolar cell | 3 studies | 56% ± 22% | |
endothelial cell of vascular tree | 3 studies | 25% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
heart | 4 studies | 25% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 97% | 14082.67 | 237 / 245 | 99% | 53.75 | 496 / 502 |
adrenal gland | 97% | 9089.74 | 251 / 258 | 68% | 14.94 | 156 / 230 |
bladder | 100% | 34110.62 | 21 / 21 | 46% | 6.99 | 232 / 504 |
intestine | 86% | 26334.06 | 829 / 966 | 51% | 5.01 | 269 / 527 |
uterus | 98% | 21768.79 | 167 / 170 | 36% | 12.89 | 163 / 459 |
breast | 78% | 3142.68 | 359 / 459 | 52% | 3.24 | 577 / 1118 |
esophagus | 87% | 23758.61 | 1264 / 1445 | 38% | 4.68 | 70 / 183 |
thymus | 51% | 1596.06 | 331 / 653 | 62% | 4.04 | 376 / 605 |
stomach | 54% | 9094.60 | 194 / 359 | 58% | 9.94 | 166 / 286 |
ovary | 51% | 2177.94 | 92 / 180 | 51% | 4.82 | 220 / 430 |
blood vessel | 100% | 13659.37 | 1329 / 1335 | 0% | 0 | 0 / 0 |
kidney | 16% | 427.58 | 14 / 89 | 82% | 8.54 | 738 / 901 |
lung | 51% | 1582.76 | 295 / 578 | 44% | 5.09 | 507 / 1155 |
heart | 94% | 10963.11 | 809 / 861 | 0% | 0 | 0 / 0 |
brain | 0% | 7.47 | 7 / 2642 | 90% | 5.95 | 634 / 705 |
adipose | 81% | 3924.22 | 978 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 63% | 6.18 | 113 / 178 |
muscle | 56% | 1805.63 | 446 / 803 | 0% | 0 | 0 / 0 |
skin | 16% | 496.49 | 292 / 1809 | 26% | 1.68 | 124 / 472 |
lymph node | 0% | 0 | 0 / 0 | 34% | 1.12 | 10 / 29 |
liver | 0% | 0 | 0 / 226 | 23% | 1.61 | 94 / 406 |
tonsil | 0% | 0 | 0 / 0 | 13% | 0.50 | 6 / 45 |
spleen | 7% | 176.25 | 16 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 4% | 0.16 | 3 / 80 |
peripheral blood | 0% | 8.99 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0014706 | Biological process | striated muscle tissue development |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0007155 | Biological process | cell adhesion |
GO_0030239 | Biological process | myofibril assembly |
GO_0030055 | Cellular component | cell-substrate junction |
GO_0005914 | Cellular component | spot adherens junction |
GO_0043034 | Cellular component | costamere |
GO_0030018 | Cellular component | Z disc |
GO_0009898 | Cellular component | cytoplasmic side of plasma membrane |
GO_0042383 | Cellular component | sarcolemma |
GO_0016010 | Cellular component | dystrophin-associated glycoprotein complex |
GO_0005925 | Cellular component | focal adhesion |
GO_0001725 | Cellular component | stress fiber |
GO_0005829 | Cellular component | cytosol |
GO_0005912 | Cellular component | adherens junction |
GO_0014704 | Cellular component | intercalated disc |
GO_0000287 | Molecular function | magnesium ion binding |
GO_0005198 | Molecular function | structural molecule activity |
GO_0004614 | Molecular function | phosphoglucomutase activity |
Gene name | PGM5 |
Protein name | Phosphoglucomutase 5 Phosphoglucomutase-like protein 5 (Aciculin) (Phosphoglucomutase-related protein) (PGM-RP) |
Synonyms | PGMRP |
Description | FUNCTION: Component of adherens-type cell-cell and cell-matrix junctions . Has no phosphoglucomutase activity in vitro . . |
Accessions | Q5JTY7 ENST00000396392.5 [Q15124-2] Q15124 ENST00000396396.6 [Q15124-1] ENST00000431583.1 |