Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2651.58 | 1445 / 1445 | 100% | 22.07 | 183 / 183 |
liver | 100% | 2602.38 | 226 / 226 | 100% | 33.22 | 406 / 406 |
ovary | 100% | 2595.89 | 180 / 180 | 100% | 33.83 | 430 / 430 |
pancreas | 100% | 2000.39 | 328 / 328 | 100% | 28.93 | 178 / 178 |
uterus | 100% | 2756.08 | 170 / 170 | 100% | 46.97 | 459 / 459 |
brain | 100% | 2220.29 | 2639 / 2642 | 100% | 45.14 | 705 / 705 |
thymus | 100% | 2529.45 | 653 / 653 | 100% | 39.82 | 603 / 605 |
adrenal gland | 100% | 3215.49 | 258 / 258 | 100% | 35.40 | 229 / 230 |
breast | 100% | 2477.30 | 459 / 459 | 99% | 42.66 | 1110 / 1118 |
prostate | 100% | 3519.62 | 245 / 245 | 99% | 49.86 | 498 / 502 |
skin | 100% | 2938.87 | 1809 / 1809 | 99% | 47.75 | 467 / 472 |
kidney | 100% | 2456.70 | 89 / 89 | 99% | 30.03 | 891 / 901 |
intestine | 100% | 2556.73 | 966 / 966 | 99% | 36.28 | 521 / 527 |
stomach | 100% | 2209.64 | 359 / 359 | 99% | 30.20 | 282 / 286 |
bladder | 100% | 2607.05 | 21 / 21 | 98% | 39.60 | 496 / 504 |
lung | 100% | 2196.69 | 576 / 578 | 99% | 34.24 | 1138 / 1155 |
adipose | 100% | 2303.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 41.45 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 49.84 | 29 / 29 |
spleen | 100% | 2947.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 40.33 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 43.45 | 1 / 1 |
muscle | 100% | 2145.16 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2276.79 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 1678.81 | 858 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1669.13 | 897 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016226 | Biological process | iron-sulfur cluster assembly |
GO_0030030 | Biological process | cell projection organization |
GO_0005814 | Cellular component | centriole |
GO_0005929 | Cellular component | cilium |
GO_0031616 | Cellular component | spindle pole centrosome |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0005524 | Molecular function | ATP binding |
GO_0140663 | Molecular function | ATP-dependent FeS chaperone activity |
GO_0051536 | Molecular function | iron-sulfur cluster binding |
GO_0005515 | Molecular function | protein binding |
GO_0051539 | Molecular function | 4 iron, 4 sulfur cluster binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0000166 | Molecular function | nucleotide binding |
Gene name | NUBP2 |
Protein name | NUBP iron-sulfur cluster assembly factor 2, cytosolic Cytosolic Fe-S cluster assembly factor NUBP2 (Nucleotide-binding protein 2) (NBP 2) NUBP iron-sulfur cluster assembly factor 2, cytosolic (Nucleotide binding protein 2 (MinD homolog, E. coli), isoform CRA_d) (cDNA FLJ57200, highly similar to Nucleotide-binding protein 2) |
Synonyms | hCG_42691 |
Description | FUNCTION: Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NUBP1-NUBP2 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Negatively regulates cilium formation and structure. . FUNCTION: Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NUBP1-NUBP2 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. . |
Accessions | Q9Y5Y2 ENST00000562263.5 H3BQR2 H3BQE5 ENST00000568287.5 H3BRK5 H3BNF0 ENST00000569898.5 ENST00000565987.5 H3BRE1 ENST00000565134.5 ENST00000568706.1 ENST00000262302.14 ENST00000564227.5 ENST00000568834.5 B2RDN3 H3BNS4 ENST00000563136.5 B7Z6P0 H3BMW1 |