Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 14 studies | 59% ± 17% | |
astrocyte | 12 studies | 34% ± 16% | |
GABAergic neuron | 9 studies | 29% ± 10% | |
glutamatergic neuron | 9 studies | 42% ± 17% | |
neuron | 6 studies | 27% ± 11% | |
fibroblast | 6 studies | 21% ± 8% | |
podocyte | 5 studies | 63% ± 29% | |
retinal bipolar neuron | 4 studies | 45% ± 28% | |
retinal ganglion cell | 4 studies | 52% ± 25% | |
GABAergic interneuron | 3 studies | 26% ± 10% | |
mesothelial cell | 3 studies | 50% ± 19% | |
rod bipolar cell | 3 studies | 83% ± 13% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 11 studies | 26% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 97% | 577.78 | 238 / 245 | 79% | 5.12 | 399 / 502 |
brain | 98% | 663.28 | 2592 / 2642 | 75% | 3.25 | 532 / 705 |
lung | 98% | 614.04 | 568 / 578 | 14% | 0.52 | 160 / 1155 |
bladder | 100% | 700.48 | 21 / 21 | 10% | 0.42 | 52 / 504 |
kidney | 92% | 1220.91 | 82 / 89 | 12% | 0.38 | 111 / 901 |
skin | 64% | 259.35 | 1157 / 1809 | 25% | 1.83 | 118 / 472 |
adrenal gland | 19% | 72.27 | 50 / 258 | 58% | 7.23 | 134 / 230 |
intestine | 61% | 213.27 | 585 / 966 | 2% | 0.10 | 13 / 527 |
adipose | 59% | 296.14 | 715 / 1204 | 0% | 0 | 0 / 0 |
uterus | 35% | 114.68 | 60 / 170 | 21% | 1.56 | 96 / 459 |
eye | 0% | 0 | 0 / 0 | 50% | 2.28 | 40 / 80 |
ovary | 13% | 18.97 | 24 / 180 | 28% | 0.84 | 120 / 430 |
esophagus | 36% | 90.97 | 513 / 1445 | 3% | 0.26 | 5 / 183 |
breast | 13% | 22.55 | 58 / 459 | 19% | 1.94 | 218 / 1118 |
lymph node | 0% | 0 | 0 / 0 | 31% | 1.24 | 9 / 29 |
blood vessel | 23% | 42.24 | 301 / 1335 | 0% | 0 | 0 / 0 |
stomach | 16% | 30.44 | 57 / 359 | 4% | 0.20 | 12 / 286 |
spleen | 19% | 37.82 | 45 / 241 | 0% | 0 | 0 / 0 |
thymus | 13% | 19.76 | 85 / 653 | 3% | 0.10 | 20 / 605 |
pancreas | 2% | 2.41 | 6 / 328 | 11% | 0.34 | 20 / 178 |
peripheral blood | 9% | 20.47 | 85 / 929 | 0% | 0 | 0 / 0 |
heart | 5% | 6.78 | 40 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.05 | 1 / 45 |
muscle | 1% | 1.57 | 10 / 803 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 1% | 0.08 | 5 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007409 | Biological process | axonogenesis |
GO_0010975 | Biological process | regulation of neuron projection development |
GO_0099560 | Biological process | synaptic membrane adhesion |
GO_0050804 | Biological process | modulation of chemical synaptic transmission |
GO_2001222 | Biological process | regulation of neuron migration |
GO_0150011 | Biological process | regulation of neuron projection arborization |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0048787 | Cellular component | presynaptic active zone membrane |
GO_0098552 | Cellular component | side of membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0098632 | Molecular function | cell-cell adhesion mediator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | NTNG1 |
Protein name | Netrin G1 isoform G1e Netrin G1 isoform G1c Netrin-G1 (Laminet-1) Netrin G1 isoform A Netrin G1 isoform G1b Netrin G1 isoform G1l Netrin G1 isoform G1d Netrin G1 isoform G1n Netrin G1 isoform G1m Netrin G1 isoform G1o |
Synonyms | LMNT1 KIAA0976 UNQ571/PRO1133 |
Description | FUNCTION: Involved in controlling patterning and neuronal circuit formation at the laminar, cellular, subcellular and synaptic levels. Promotes neurite outgrowth of both axons and dendrites. . |
Accessions | ENST00000370068.6 [Q9Y2I2-3] Q5IEC7 Q5IEC1 Q5ICN7 Q5IEC4 X5DNW2 Q5IEC6 ENST00000370073.6 [Q9Y2I2-3] Q5IEC5 ENST00000370074.8 [Q9Y2I2-1] Q9Y2I2 ENST00000370067.5 [Q9Y2I2-5] Q5IEC2 Q5IEC3 ENST00000370065.1 [Q9Y2I2-6] ENST00000370066.5 [Q9Y2I2-4] |