Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 12 studies | 35% ± 15% | |
glutamatergic neuron | 11 studies | 42% ± 19% | |
GABAergic neuron | 10 studies | 40% ± 20% | |
neuron | 7 studies | 37% ± 9% | |
interneuron | 7 studies | 44% ± 22% | |
amacrine cell | 6 studies | 40% ± 14% | |
oligodendrocyte | 6 studies | 22% ± 4% | |
retina horizontal cell | 5 studies | 27% ± 9% | |
astrocyte | 5 studies | 21% ± 6% | |
GABAergic interneuron | 3 studies | 42% ± 13% | |
granule cell | 3 studies | 48% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 13 studies | 34% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 16846.85 | 2642 / 2642 | 100% | 89.62 | 702 / 705 |
ovary | 97% | 2194.38 | 175 / 180 | 44% | 4.91 | 188 / 430 |
kidney | 57% | 970.66 | 51 / 89 | 71% | 8.86 | 637 / 901 |
uterus | 96% | 3065.99 | 164 / 170 | 22% | 3.21 | 100 / 459 |
adrenal gland | 10% | 165.40 | 26 / 258 | 71% | 16.96 | 164 / 230 |
intestine | 61% | 1581.01 | 593 / 966 | 16% | 1.24 | 82 / 527 |
pancreas | 9% | 109.94 | 29 / 328 | 63% | 4.52 | 113 / 178 |
prostate | 37% | 520.34 | 91 / 245 | 21% | 1.08 | 104 / 502 |
bladder | 43% | 664.62 | 9 / 21 | 8% | 0.47 | 39 / 504 |
thymus | 29% | 390.76 | 188 / 653 | 20% | 1.46 | 120 / 605 |
stomach | 15% | 212.04 | 55 / 359 | 21% | 1.61 | 60 / 286 |
skin | 3% | 30.25 | 46 / 1809 | 31% | 4.60 | 146 / 472 |
blood vessel | 27% | 374.33 | 360 / 1335 | 0% | 0 | 0 / 0 |
liver | 7% | 72.27 | 15 / 226 | 19% | 1.00 | 78 / 406 |
breast | 12% | 153.05 | 54 / 459 | 12% | 0.69 | 132 / 1118 |
eye | 0% | 0 | 0 / 0 | 21% | 1.79 | 17 / 80 |
esophagus | 7% | 90.47 | 102 / 1445 | 11% | 0.87 | 20 / 183 |
lung | 3% | 43.26 | 19 / 578 | 12% | 0.90 | 138 / 1155 |
adipose | 12% | 161.62 | 142 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.30 | 3 / 45 |
heart | 4% | 49.26 | 32 / 861 | 0% | 0 | 0 / 0 |
spleen | 1% | 13.20 | 3 / 241 | 0% | 0 | 0 / 0 |
muscle | 1% | 7.98 | 5 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0097119 | Biological process | postsynaptic density protein 95 clustering |
GO_0097104 | Biological process | postsynaptic membrane assembly |
GO_0042297 | Biological process | vocal learning |
GO_0007269 | Biological process | neurotransmitter secretion |
GO_0007165 | Biological process | signal transduction |
GO_0097116 | Biological process | gephyrin clustering involved in postsynaptic density assembly |
GO_0097118 | Biological process | neuroligin clustering involved in postsynaptic membrane assembly |
GO_0071625 | Biological process | vocalization behavior |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0030534 | Biological process | adult behavior |
GO_0007416 | Biological process | synapse assembly |
GO_0035176 | Biological process | social behavior |
GO_0007158 | Biological process | neuron cell-cell adhesion |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0032991 | Cellular component | protein-containing complex |
GO_0042734 | Cellular component | presynaptic membrane |
GO_0042995 | Cellular component | cell projection |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0005246 | Molecular function | calcium channel regulator activity |
GO_0097109 | Molecular function | neuroligin family protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0050839 | Molecular function | cell adhesion molecule binding |
Gene name | NRXN2 |
Protein name | Neurexin-2 (Neurexin II-alpha) (Neurexin-2-alpha) Neurexin-2-beta (Neurexin II-beta) Neurexin 2 |
Synonyms | KIAA0921 hCG_1810991 |
Description | FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. |
Accessions | ENST00000704782.1 P58401 A0A8I5QJA1 ENST00000417749.6 A0A994J4N8 A0A8I5QJ84 Q9P2S2 G5E9G7 ENST00000377559.7 [Q9P2S2-2] H7C2R8 ENST00000688050.1 ENST00000437746.2 ENST00000409571.6 A0A994J5C3 A0A8I5QKZ8 ENST00000423049.2 H7C3J4 H7C3D6 ENST00000301894.6 [P58401-1] A0A8I5KTJ4 ENST00000689935.1 ENST00000704781.1 ENST00000693456.1 ENST00000688454.1 H7BZC7 ENST00000487484.1 ENST00000265459.11 [Q9P2S2-1] ENST00000442300.5 A0A8I5KY42 |