Name | Number of supported studies | Average coverage | |
---|---|---|---|
CD4-positive, alpha-beta T cell | 6 studies | 23% ± 6% | |
epithelial cell | 5 studies | 33% ± 17% | |
fibroblast | 5 studies | 23% ± 9% | |
basal cell | 5 studies | 24% ± 12% | |
regulatory T cell | 5 studies | 21% ± 2% | |
B cell | 4 studies | 19% ± 5% | |
endothelial cell | 4 studies | 29% ± 7% | |
CD8-positive, alpha-beta T cell | 4 studies | 25% ± 6% | |
hematopoietic precursor cell | 3 studies | 31% ± 9% | |
conventional dendritic cell | 3 studies | 28% ± 10% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 22% ± 2% | |
connective tissue cell | 3 studies | 19% ± 2% | |
natural killer cell | 3 studies | 25% ± 4% | |
ciliated cell | 3 studies | 20% ± 4% | |
abnormal cell | 3 studies | 21% ± 3% | |
endothelial cell of vascular tree | 3 studies | 18% ± 3% | |
dendritic cell | 3 studies | 33% ± 10% | |
intestinal crypt stem cell | 3 studies | 27% ± 7% | |
hematopoietic stem cell | 3 studies | 23% ± 4% | |
CD4-positive, alpha-beta memory T cell | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 2320.61 | 180 / 180 | 100% | 58.69 | 430 / 430 |
stomach | 100% | 1450.76 | 359 / 359 | 100% | 83.67 | 286 / 286 |
esophagus | 100% | 1454.68 | 1444 / 1445 | 100% | 64.18 | 183 / 183 |
intestine | 100% | 1255.97 | 965 / 966 | 100% | 94.14 | 526 / 527 |
pancreas | 100% | 2598.88 | 327 / 328 | 100% | 53.78 | 178 / 178 |
bladder | 100% | 1675.38 | 21 / 21 | 100% | 68.61 | 502 / 504 |
prostate | 100% | 1292.62 | 245 / 245 | 100% | 54.13 | 500 / 502 |
skin | 100% | 2456.16 | 1809 / 1809 | 99% | 59.17 | 469 / 472 |
thymus | 100% | 1504.76 | 653 / 653 | 99% | 58.45 | 601 / 605 |
lung | 99% | 1137.51 | 574 / 578 | 100% | 57.77 | 1154 / 1155 |
uterus | 100% | 1598.46 | 170 / 170 | 99% | 56.19 | 455 / 459 |
breast | 100% | 1766.34 | 459 / 459 | 99% | 44.20 | 1106 / 1118 |
kidney | 100% | 1046.92 | 89 / 89 | 98% | 42.44 | 881 / 901 |
brain | 97% | 732.36 | 2565 / 2642 | 100% | 38.45 | 705 / 705 |
adrenal gland | 100% | 2538.23 | 258 / 258 | 93% | 30.05 | 214 / 230 |
liver | 98% | 613.47 | 221 / 226 | 91% | 26.75 | 371 / 406 |
adipose | 100% | 1726.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 84.85 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 78.73 | 29 / 29 |
spleen | 100% | 1318.91 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.50 | 1 / 1 |
blood vessel | 100% | 1250.78 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1159.50 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 93% | 614.37 | 797 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 1459.83 | 838 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007601 | Biological process | visual perception |
GO_0006364 | Biological process | rRNA processing |
GO_0030490 | Biological process | maturation of SSU-rRNA |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0030688 | Cellular component | preribosome, small subunit precursor |
GO_0004521 | Molecular function | RNA endonuclease activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | NOB1 |
Protein name | RNA-binding protein NOB1 (EC 3.1.-.-) (Phosphorylation regulatory protein HP-10) (Protein ART-4) NIN1 (RPN12) binding protein 1 homolog |
Synonyms | MSTP158 PSMD8BP1 ART4 NOB1P |
Description | FUNCTION: May play a role in mRNA degradation (Probable). Endonuclease required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits (By similarity). . |
Accessions | ENST00000268802.10 ENST00000564620.5 ENST00000569871.5 H3BUR4 Q9ULX3 |