Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| CD4-positive, alpha-beta T cell | 6 studies | 23% ± 6% | |
| epithelial cell | 5 studies | 33% ± 17% | |
| fibroblast | 5 studies | 23% ± 9% | |
| basal cell | 5 studies | 24% ± 12% | |
| regulatory T cell | 5 studies | 21% ± 2% | |
| B cell | 4 studies | 19% ± 5% | |
| endothelial cell | 4 studies | 29% ± 7% | |
| CD8-positive, alpha-beta T cell | 4 studies | 25% ± 6% | |
| hematopoietic precursor cell | 3 studies | 31% ± 9% | |
| conventional dendritic cell | 3 studies | 28% ± 10% | |
| naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
| naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 22% ± 2% | |
| connective tissue cell | 3 studies | 19% ± 2% | |
| natural killer cell | 3 studies | 25% ± 4% | |
| ciliated cell | 3 studies | 20% ± 4% | |
| abnormal cell | 3 studies | 21% ± 3% | |
| endothelial cell of vascular tree | 3 studies | 18% ± 3% | |
| dendritic cell | 3 studies | 33% ± 10% | |
| intestinal crypt stem cell | 3 studies | 27% ± 7% | |
| hematopoietic stem cell | 3 studies | 23% ± 4% | |
| CD4-positive, alpha-beta memory T cell | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| ovary | 100% | 2320.61 | 180 / 180 | 100% | 58.69 | 430 / 430 |
| stomach | 100% | 1450.76 | 359 / 359 | 100% | 83.67 | 286 / 286 |
| esophagus | 100% | 1454.68 | 1444 / 1445 | 100% | 64.18 | 183 / 183 |
| intestine | 100% | 1255.97 | 965 / 966 | 100% | 94.14 | 526 / 527 |
| pancreas | 100% | 2598.88 | 327 / 328 | 100% | 53.78 | 178 / 178 |
| bladder | 100% | 1675.38 | 21 / 21 | 100% | 68.61 | 502 / 504 |
| prostate | 100% | 1292.62 | 245 / 245 | 100% | 54.13 | 500 / 502 |
| skin | 100% | 2456.16 | 1809 / 1809 | 99% | 59.17 | 469 / 472 |
| thymus | 100% | 1504.76 | 653 / 653 | 99% | 58.45 | 601 / 605 |
| lung | 99% | 1137.51 | 574 / 578 | 100% | 57.77 | 1154 / 1155 |
| uterus | 100% | 1598.46 | 170 / 170 | 99% | 56.19 | 455 / 459 |
| breast | 100% | 1766.34 | 459 / 459 | 99% | 44.20 | 1106 / 1118 |
| kidney | 100% | 1046.92 | 89 / 89 | 98% | 42.44 | 881 / 901 |
| brain | 97% | 732.36 | 2565 / 2642 | 100% | 38.45 | 705 / 705 |
| adrenal gland | 100% | 2538.23 | 258 / 258 | 93% | 30.05 | 214 / 230 |
| liver | 98% | 613.47 | 221 / 226 | 91% | 26.75 | 371 / 406 |
| adipose | 100% | 1726.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 84.85 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 78.73 | 29 / 29 |
| spleen | 100% | 1318.91 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 52.41 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 27.50 | 1 / 1 |
| blood vessel | 100% | 1250.78 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 1159.50 | 799 / 803 | 0% | 0 | 0 / 0 |
| heart | 93% | 614.37 | 797 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 90% | 1459.83 | 838 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0007601 | Biological process | visual perception |
| GO_0006364 | Biological process | rRNA processing |
| GO_0030490 | Biological process | maturation of SSU-rRNA |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0030688 | Cellular component | preribosome, small subunit precursor |
| GO_0004521 | Molecular function | RNA endonuclease activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | NOB1 |
| Protein name | RNA-binding protein NOB1 (EC 3.1.-.-) (Phosphorylation regulatory protein HP-10) (Protein ART-4) NIN1 (RPN12) binding protein 1 homolog |
| Synonyms | MSTP158 PSMD8BP1 ART4 NOB1P |
| Description | FUNCTION: May play a role in mRNA degradation (Probable). Endonuclease required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits (By similarity). . |
| Accessions | ENST00000268802.10 ENST00000564620.5 ENST00000569871.5 H3BUR4 Q9ULX3 |