Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 25% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 10938.19 | 2639 / 2642 | 100% | 150.29 | 705 / 705 |
prostate | 100% | 7098.76 | 244 / 245 | 98% | 19.34 | 491 / 502 |
ovary | 100% | 13993.69 | 180 / 180 | 97% | 31.90 | 415 / 430 |
breast | 100% | 5089.80 | 458 / 459 | 96% | 21.07 | 1073 / 1118 |
adrenal gland | 100% | 3857.69 | 258 / 258 | 95% | 27.21 | 218 / 230 |
uterus | 100% | 15061.89 | 170 / 170 | 92% | 25.28 | 421 / 459 |
skin | 99% | 3578.82 | 1791 / 1809 | 93% | 22.16 | 437 / 472 |
lung | 99% | 3657.26 | 571 / 578 | 87% | 18.13 | 1006 / 1155 |
thymus | 99% | 3372.39 | 648 / 653 | 84% | 11.58 | 506 / 605 |
kidney | 98% | 3278.06 | 87 / 89 | 82% | 15.21 | 741 / 901 |
bladder | 100% | 7010.14 | 21 / 21 | 78% | 17.12 | 395 / 504 |
esophagus | 94% | 5026.97 | 1357 / 1445 | 80% | 21.83 | 146 / 183 |
intestine | 95% | 5851.24 | 917 / 966 | 54% | 8.02 | 286 / 527 |
pancreas | 41% | 757.82 | 135 / 328 | 96% | 22.57 | 170 / 178 |
stomach | 70% | 2986.37 | 253 / 359 | 65% | 10.46 | 187 / 286 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.67 | 1 / 1 |
blood vessel | 100% | 5574.63 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 5009.90 | 1202 / 1204 | 0% | 0 | 0 / 0 |
spleen | 99% | 3750.05 | 239 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 17.03 | 42 / 45 |
eye | 0% | 0 | 0 / 0 | 90% | 11.83 | 72 / 80 |
heart | 88% | 2269.06 | 756 / 861 | 0% | 0 | 0 / 0 |
muscle | 61% | 1185.88 | 492 / 803 | 0% | 0 | 0 / 0 |
liver | 36% | 678.95 | 82 / 226 | 21% | 3.17 | 86 / 406 |
lymph node | 0% | 0 | 0 / 0 | 28% | 2.39 | 8 / 29 |
peripheral blood | 0% | 4.53 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0019233 | Biological process | sensory perception of pain |
GO_1902474 | Biological process | positive regulation of protein localization to synapse |
GO_0001966 | Biological process | thigmotaxis |
GO_0097119 | Biological process | postsynaptic density protein 95 clustering |
GO_0002087 | Biological process | regulation of respiratory gaseous exchange by nervous system process |
GO_0007630 | Biological process | jump response |
GO_0097104 | Biological process | postsynaptic membrane assembly |
GO_0050804 | Biological process | modulation of chemical synaptic transmission |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0048488 | Biological process | synaptic vesicle endocytosis |
GO_0050885 | Biological process | neuromuscular process controlling balance |
GO_2000809 | Biological process | positive regulation of synaptic vesicle clustering |
GO_0034394 | Biological process | protein localization to cell surface |
GO_0097116 | Biological process | gephyrin clustering involved in postsynaptic density assembly |
GO_0032024 | Biological process | positive regulation of insulin secretion |
GO_2000463 | Biological process | positive regulation of excitatory postsynaptic potential |
GO_1904862 | Biological process | inhibitory synapse assembly |
GO_0097151 | Biological process | positive regulation of inhibitory postsynaptic potential |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0060999 | Biological process | positive regulation of dendritic spine development |
GO_2000311 | Biological process | regulation of AMPA receptor activity |
GO_0099054 | Biological process | presynapse assembly |
GO_1901142 | Biological process | insulin metabolic process |
GO_1904034 | Biological process | positive regulation of t-SNARE clustering |
GO_0072578 | Biological process | neurotransmitter-gated ion channel clustering |
GO_0072553 | Biological process | terminal button organization |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0051932 | Biological process | synaptic transmission, GABAergic |
GO_0051968 | Biological process | positive regulation of synaptic transmission, glutamatergic |
GO_0007416 | Biological process | synapse assembly |
GO_0035418 | Biological process | protein localization to synapse |
GO_0032230 | Biological process | positive regulation of synaptic transmission, GABAergic |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0007158 | Biological process | neuron cell-cell adhesion |
GO_0050808 | Biological process | synapse organization |
GO_0035176 | Biological process | social behavior |
GO_0035641 | Biological process | locomotory exploration behavior |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0097105 | Biological process | presynaptic membrane assembly |
GO_0045217 | Biological process | cell-cell junction maintenance |
GO_0098690 | Cellular component | glycinergic synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0043198 | Cellular component | dendritic shaft |
GO_0060077 | Cellular component | inhibitory synapse |
GO_0098691 | Cellular component | dopaminergic synapse |
GO_0042734 | Cellular component | presynaptic membrane |
GO_0097470 | Cellular component | ribbon synapse |
GO_0009986 | Cellular component | cell surface |
GO_0045202 | Cellular component | synapse |
GO_0099634 | Cellular component | postsynaptic specialization membrane |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0060076 | Cellular component | excitatory synapse |
GO_0098983 | Cellular component | symmetric, GABA-ergic, inhibitory synapse |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0042043 | Molecular function | neurexin family protein binding |
GO_0050839 | Molecular function | cell adhesion molecule binding |
Gene name | NLGN2 |
Protein name | Neuroligin-2 Neuroligin 2 |
Synonyms | KIAA1366 |
Description | FUNCTION: Transmembrane scaffolding protein involved in cell-cell interactions via its interactions with neurexin family members. Mediates cell-cell interactions both in neurons and in other types of cells, such as Langerhans beta cells. Plays a role in synapse function and synaptic signal transmission, especially via gamma-aminobutyric acid receptors (GABA(A) receptors). Functions by recruiting and clustering synaptic proteins. Promotes clustering of postsynaptic GABRG2 and GPHN. Promotes clustering of postsynaptic LHFPL4 (By similarity). Modulates signaling by inhibitory synapses, and thereby plays a role in controlling the ratio of signaling by excitatory and inhibitory synapses and information processing. Required for normal signal amplitude from inhibitory synapses, but is not essential for normal signal frequency. May promote the initial formation of synapses, but is not essential for this. In vitro, triggers the de novo formation of presynaptic structures. Mediates cell-cell interactions between Langerhans beta cells and modulates insulin secretion (By similarity). . |
Accessions | ENST00000570940.1 Q8NFZ4 I3L498 ENST00000302926.7 ENST00000640620.2 ENST00000639647.1 ENST00000575301.5 |