Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 9 studies | 33% ± 14% | |
endothelial cell | 9 studies | 22% ± 5% | |
classical monocyte | 7 studies | 23% ± 11% | |
oligodendrocyte precursor cell | 7 studies | 31% ± 12% | |
oligodendrocyte | 6 studies | 22% ± 5% | |
epithelial cell | 3 studies | 22% ± 7% | |
GABAergic neuron | 3 studies | 30% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 25% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 12198.62 | 2642 / 2642 | 100% | 103.24 | 705 / 705 |
intestine | 98% | 7800.70 | 951 / 966 | 98% | 16.71 | 514 / 527 |
prostate | 96% | 4511.03 | 234 / 245 | 99% | 21.51 | 497 / 502 |
lung | 99% | 3492.74 | 571 / 578 | 94% | 15.49 | 1088 / 1155 |
thymus | 96% | 2230.40 | 627 / 653 | 95% | 16.11 | 574 / 605 |
kidney | 92% | 2356.71 | 82 / 89 | 99% | 18.12 | 889 / 901 |
breast | 95% | 2889.34 | 437 / 459 | 95% | 15.87 | 1066 / 1118 |
uterus | 99% | 5649.87 | 168 / 170 | 89% | 14.57 | 409 / 459 |
esophagus | 92% | 7115.40 | 1324 / 1445 | 96% | 18.09 | 175 / 183 |
stomach | 91% | 4158.78 | 325 / 359 | 96% | 20.34 | 274 / 286 |
adrenal gland | 100% | 3981.31 | 257 / 258 | 79% | 11.92 | 182 / 230 |
bladder | 95% | 7997.57 | 20 / 21 | 83% | 11.59 | 418 / 504 |
skin | 72% | 1971.24 | 1304 / 1809 | 98% | 30.95 | 464 / 472 |
liver | 74% | 1600.99 | 167 / 226 | 94% | 12.16 | 381 / 406 |
ovary | 93% | 2570.13 | 168 / 180 | 71% | 8.08 | 307 / 430 |
pancreas | 64% | 1141.16 | 209 / 328 | 97% | 15.44 | 172 / 178 |
blood vessel | 100% | 7863.43 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2910.23 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 3576.03 | 1192 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 37.62 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 12.99 | 44 / 45 |
muscle | 97% | 3467.08 | 777 / 803 | 0% | 0 | 0 / 0 |
heart | 90% | 3416.86 | 778 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 62% | 7.01 | 18 / 29 |
peripheral blood | 51% | 1716.78 | 472 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051260 | Biological process | protein homooligomerization |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_1902231 | Biological process | positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0031503 | Biological process | protein-containing complex localization |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005730 | Cellular component | nucleolus |
GO_0005739 | Cellular component | mitochondrion |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0042826 | Molecular function | histone deacetylase binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
Gene name | NACC2 |
Protein name | Nucleus accumbens-associated protein 2 (NAC-2) (BTB/POZ domain-containing protein 14A) (Repressor with BTB domain and BEN domain) |
Synonyms | BTBD14A NAC2 RBB |
Description | FUNCTION: Functions as a transcriptional repressor through its association with the NuRD complex. Recruits the NuRD complex to the promoter of MDM2, leading to the repression of MDM2 transcription and subsequent stability of p53/TP53. . |
Accessions | ENST00000277554.4 ENST00000371753.5 Q96BF6 |