Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 31 studies | 26% ± 7% | |
pericyte | 25 studies | 23% ± 5% | |
smooth muscle cell | 18 studies | 22% ± 7% | |
capillary endothelial cell | 12 studies | 25% ± 6% | |
fibroblast | 11 studies | 21% ± 5% | |
type I pneumocyte | 11 studies | 38% ± 12% | |
endothelial cell of artery | 10 studies | 25% ± 6% | |
epithelial cell | 8 studies | 29% ± 14% | |
adipocyte | 8 studies | 33% ± 6% | |
endothelial cell of lymphatic vessel | 7 studies | 18% ± 4% | |
goblet cell | 7 studies | 27% ± 7% | |
vein endothelial cell | 7 studies | 21% ± 5% | |
endothelial cell of vascular tree | 7 studies | 24% ± 9% | |
basal cell | 5 studies | 26% ± 7% | |
glomerular endothelial cell | 4 studies | 50% ± 3% | |
precursor B cell | 4 studies | 32% ± 10% | |
myofibroblast cell | 4 studies | 22% ± 3% | |
retinal pigment epithelial cell | 4 studies | 23% ± 7% | |
ionocyte | 3 studies | 24% ± 8% | |
squamous epithelial cell | 3 studies | 33% ± 20% | |
secretory cell | 3 studies | 22% ± 9% | |
enteroendocrine cell | 3 studies | 17% ± 1% | |
connective tissue cell | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 23410.49 | 1445 / 1445 | 100% | 115.31 | 183 / 183 |
thymus | 100% | 16055.30 | 652 / 653 | 100% | 115.79 | 605 / 605 |
uterus | 100% | 21768.43 | 170 / 170 | 100% | 86.99 | 458 / 459 |
breast | 100% | 28689.60 | 459 / 459 | 100% | 125.15 | 1115 / 1118 |
prostate | 100% | 17921.14 | 244 / 245 | 100% | 121.00 | 502 / 502 |
skin | 100% | 16140.26 | 1808 / 1809 | 100% | 124.59 | 470 / 472 |
kidney | 100% | 12408.62 | 89 / 89 | 99% | 125.30 | 896 / 901 |
intestine | 100% | 21611.44 | 966 / 966 | 99% | 98.61 | 524 / 527 |
stomach | 100% | 14912.91 | 359 / 359 | 99% | 99.86 | 284 / 286 |
lung | 100% | 22007.42 | 578 / 578 | 99% | 90.01 | 1146 / 1155 |
bladder | 100% | 20746.71 | 21 / 21 | 99% | 90.04 | 500 / 504 |
pancreas | 99% | 9275.48 | 325 / 328 | 100% | 106.69 | 178 / 178 |
ovary | 100% | 10108.12 | 180 / 180 | 98% | 69.07 | 421 / 430 |
liver | 81% | 4599.00 | 183 / 226 | 97% | 60.15 | 395 / 406 |
adrenal gland | 96% | 6202.71 | 247 / 258 | 80% | 37.18 | 184 / 230 |
adipose | 100% | 34687.77 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 28526.59 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 156.59 | 80 / 80 |
tonsil | 0% | 0 | 0 / 0 | 100% | 83.88 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 51.17 | 1 / 1 |
heart | 99% | 13344.65 | 856 / 861 | 0% | 0 | 0 / 0 |
spleen | 99% | 7406.29 | 239 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 54.18 | 28 / 29 |
muscle | 95% | 6631.84 | 760 / 803 | 0% | 0 | 0 / 0 |
brain | 7% | 301.76 | 193 / 2642 | 38% | 10.35 | 266 / 705 |
peripheral blood | 19% | 2466.78 | 178 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1900078 | Biological process | positive regulation of cellular response to insulin stimulus |
GO_0006897 | Biological process | endocytosis |
GO_0030048 | Biological process | actin filament-based movement |
GO_0030050 | Biological process | vesicle transport along actin filament |
GO_0006612 | Biological process | protein targeting to membrane |
GO_0038084 | Biological process | vascular endothelial growth factor signaling pathway |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_2000810 | Biological process | regulation of bicellular tight junction assembly |
GO_0007015 | Biological process | actin filament organization |
GO_0090314 | Biological process | positive regulation of protein targeting to membrane |
GO_0071346 | Biological process | cellular response to type II interferon |
GO_0032587 | Cellular component | ruffle membrane |
GO_0005903 | Cellular component | brush border |
GO_0005902 | Cellular component | microvillus |
GO_0005730 | Cellular component | nucleolus |
GO_0031941 | Cellular component | filamentous actin |
GO_0005886 | Cellular component | plasma membrane |
GO_0045121 | Cellular component | membrane raft |
GO_0060171 | Cellular component | stereocilium membrane |
GO_0016020 | Cellular component | membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016461 | Cellular component | unconventional myosin complex |
GO_0009925 | Cellular component | basal plasma membrane |
GO_0001725 | Cellular component | stress fiber |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0016604 | Cellular component | nuclear body |
GO_0005829 | Cellular component | cytosol |
GO_0045335 | Cellular component | phagocytic vesicle |
GO_0005938 | Cellular component | cell cortex |
GO_0016328 | Cellular component | lateral plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_0051015 | Molecular function | actin filament binding |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0000146 | Molecular function | microfilament motor activity |
GO_0005524 | Molecular function | ATP binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MYO1C |
Protein name | MYO1C protein Unconventional myosin-Ic (Myosin I beta) (MMI-beta) (MMIb) Myosin IC |
Synonyms | |
Description | FUNCTION: Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Involved in glucose transporter recycling in response to insulin by regulating movement of intracellular GLUT4-containing vesicles to the plasma membrane. Component of the hair cell's (the sensory cells of the inner ear) adaptation-motor complex. Acts as a mediator of adaptation of mechanoelectrical transduction in stereocilia of vestibular hair cells. Binds phosphoinositides and links the actin cytoskeleton to cellular membranes. .; FUNCTION: [Isoform 3]: Involved in regulation of transcription. Associated with transcriptional active ribosomal genes. Appears to cooperate with the WICH chromatin-remodeling complex to facilitate transcription. Necessary for the formation of the first phosphodiester bond during transcription initiation. . |
Accessions | ENST00000648651.1 [O00159-1] ENST00000570490.5 ENST00000575335.5 I3L2C3 I3L3Y6 ENST00000575158.5 [O00159-2] ENST00000570984.7 [O00159-2] A1L180 O00159 ENST00000648446.1 [O00159-3] I3L501 ENST00000573853.5 ENST00000545534.6 ENST00000361007.7 [O00159-2] F5H6E2 ENST00000575011.1 I3L3F5 ENST00000646049.1 [O00159-2] |