Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 14 studies | 33% ± 13% | |
endothelial cell | 11 studies | 25% ± 12% | |
connective tissue cell | 10 studies | 38% ± 15% | |
endothelial cell of lymphatic vessel | 9 studies | 31% ± 12% | |
myofibroblast cell | 8 studies | 31% ± 11% | |
smooth muscle cell | 8 studies | 28% ± 6% | |
epithelial cell | 7 studies | 44% ± 25% | |
pericyte | 7 studies | 33% ± 9% | |
basal cell | 6 studies | 31% ± 17% | |
neuron | 6 studies | 47% ± 23% | |
kidney loop of Henle epithelial cell | 5 studies | 23% ± 4% | |
abnormal cell | 5 studies | 37% ± 12% | |
enteroendocrine cell | 5 studies | 46% ± 19% | |
mesothelial cell | 5 studies | 38% ± 16% | |
plasmacytoid dendritic cell | 5 studies | 26% ± 8% | |
pancreatic A cell | 4 studies | 29% ± 9% | |
progenitor cell | 4 studies | 32% ± 12% | |
epithelial cell of proximal tubule | 4 studies | 28% ± 12% | |
B cell | 4 studies | 26% ± 5% | |
retinal ganglion cell | 4 studies | 47% ± 27% | |
hematopoietic stem cell | 4 studies | 21% ± 4% | |
pro-B cell | 4 studies | 35% ± 8% | |
amacrine cell | 4 studies | 37% ± 17% | |
ciliated cell | 4 studies | 41% ± 10% | |
regulatory T cell | 4 studies | 19% ± 4% | |
hematopoietic precursor cell | 3 studies | 44% ± 12% | |
exhausted T cell | 3 studies | 21% ± 6% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 48% ± 16% | |
T cell | 3 studies | 34% ± 17% | |
neural crest cell | 3 studies | 41% ± 4% | |
precursor B cell | 3 studies | 35% ± 11% | |
astrocyte | 3 studies | 29% ± 18% | |
Mueller cell | 3 studies | 24% ± 5% | |
GABAergic neuron | 3 studies | 34% ± 12% | |
glutamatergic neuron | 3 studies | 44% ± 14% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 37% ± 22% | |
secretory cell | 3 studies | 29% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1830.78 | 180 / 180 | 100% | 37.28 | 430 / 430 |
brain | 100% | 4010.27 | 2639 / 2642 | 100% | 76.23 | 705 / 705 |
thymus | 99% | 1386.95 | 646 / 653 | 100% | 57.33 | 605 / 605 |
uterus | 99% | 1300.00 | 168 / 170 | 99% | 56.15 | 453 / 459 |
prostate | 98% | 1521.00 | 241 / 245 | 99% | 31.19 | 497 / 502 |
kidney | 99% | 1347.57 | 88 / 89 | 95% | 37.77 | 859 / 901 |
skin | 93% | 1174.38 | 1676 / 1809 | 100% | 45.77 | 472 / 472 |
adrenal gland | 95% | 1048.59 | 245 / 258 | 97% | 56.43 | 223 / 230 |
breast | 92% | 941.78 | 422 / 459 | 97% | 26.37 | 1088 / 1118 |
bladder | 90% | 763.95 | 19 / 21 | 95% | 27.15 | 477 / 504 |
lung | 74% | 603.29 | 427 / 578 | 91% | 25.03 | 1051 / 1155 |
intestine | 78% | 705.39 | 755 / 966 | 84% | 16.29 | 445 / 527 |
esophagus | 83% | 698.96 | 1194 / 1445 | 59% | 9.28 | 108 / 183 |
stomach | 53% | 488.63 | 192 / 359 | 66% | 11.76 | 189 / 286 |
pancreas | 9% | 57.41 | 29 / 328 | 96% | 24.80 | 170 / 178 |
eye | 0% | 0 | 0 / 0 | 100% | 61.50 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 50.50 | 29 / 29 |
tonsil | 0% | 0 | 0 / 0 | 100% | 36.57 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.07 | 1 / 1 |
muscle | 100% | 15604.08 | 802 / 803 | 0% | 0 | 0 / 0 |
liver | 14% | 92.82 | 31 / 226 | 81% | 17.43 | 328 / 406 |
heart | 92% | 1040.98 | 790 / 861 | 0% | 0 | 0 / 0 |
adipose | 87% | 781.51 | 1042 / 1204 | 0% | 0 | 0 / 0 |
spleen | 83% | 639.48 | 200 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 78% | 634.55 | 1039 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 21% | 467.48 | 197 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007519 | Biological process | skeletal muscle tissue development |
GO_0006936 | Biological process | muscle contraction |
GO_0030049 | Biological process | muscle filament sliding |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005859 | Cellular component | muscle myosin complex |
GO_0016460 | Cellular component | myosin II complex |
GO_0016461 | Cellular component | unconventional myosin complex |
GO_0016459 | Cellular component | myosin complex |
GO_0003774 | Molecular function | cytoskeletal motor activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0008307 | Molecular function | structural constituent of muscle |
Gene name | MYL6B |
Protein name | Myosin light chain 6B (Myosin light chain 1 slow-twitch muscle A isoform) (MLC1sa) (Smooth muscle and nonmuscle myosin light chain alkali 6B) Myosin light chain 6B |
Synonyms | MLC1SA |
Description | FUNCTION: Regulatory light chain of myosin. Does not bind calcium. |
Accessions | A0A8Q3SIC5 ENST00000553066.5 F8VSA2 F8W1I5 ENST00000695999.1 ENST00000550443.5 ENST00000552568.5 ENST00000551834.5 ENST00000696002.1 A0A8Q3SIF0 ENST00000696001.1 ENST00000696000.1 A0A8Q3SI90 P14649 |