Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 36 studies | 40% ± 16% | |
pericyte | 13 studies | 30% ± 14% | |
glutamatergic neuron | 12 studies | 64% ± 27% | |
endothelial cell of artery | 12 studies | 29% ± 13% | |
vein endothelial cell | 12 studies | 41% ± 23% | |
GABAergic neuron | 11 studies | 41% ± 23% | |
astrocyte | 11 studies | 33% ± 13% | |
basal cell | 9 studies | 39% ± 15% | |
epithelial cell | 8 studies | 29% ± 13% | |
adipocyte | 8 studies | 35% ± 9% | |
smooth muscle cell | 8 studies | 29% ± 12% | |
oligodendrocyte precursor cell | 8 studies | 31% ± 12% | |
endothelial cell of vascular tree | 7 studies | 40% ± 25% | |
fibroblast | 7 studies | 26% ± 8% | |
capillary endothelial cell | 6 studies | 32% ± 14% | |
microglial cell | 6 studies | 29% ± 15% | |
club cell | 5 studies | 33% ± 12% | |
neuron | 5 studies | 50% ± 16% | |
cardiac muscle cell | 5 studies | 32% ± 7% | |
ciliated cell | 5 studies | 28% ± 8% | |
type I pneumocyte | 5 studies | 32% ± 8% | |
type II pneumocyte | 5 studies | 28% ± 7% | |
interneuron | 5 studies | 50% ± 18% | |
Mueller cell | 4 studies | 33% ± 9% | |
amacrine cell | 4 studies | 23% ± 3% | |
respiratory goblet cell | 4 studies | 42% ± 16% | |
macrophage | 4 studies | 20% ± 2% | |
secretory cell | 3 studies | 24% ± 6% | |
GABAergic amacrine cell | 3 studies | 28% ± 8% | |
retina horizontal cell | 3 studies | 24% ± 4% | |
retinal rod cell | 3 studies | 22% ± 2% | |
hepatocyte | 3 studies | 51% ± 11% | |
abnormal cell | 3 studies | 30% ± 15% | |
ependymal cell | 3 studies | 32% ± 13% | |
alveolar macrophage | 3 studies | 24% ± 8% | |
endothelial cell of lymphatic vessel | 3 studies | 21% ± 1% | |
granule cell | 3 studies | 45% ± 30% | |
mucus secreting cell | 3 studies | 36% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4736.29 | 1445 / 1445 | 100% | 15.57 | 183 / 183 |
prostate | 100% | 5878.82 | 245 / 245 | 99% | 14.48 | 498 / 502 |
breast | 100% | 9543.54 | 459 / 459 | 99% | 27.37 | 1105 / 1118 |
lung | 100% | 5900.61 | 576 / 578 | 99% | 11.97 | 1139 / 1155 |
intestine | 100% | 3930.20 | 964 / 966 | 96% | 8.10 | 508 / 527 |
stomach | 100% | 3573.63 | 359 / 359 | 96% | 9.93 | 274 / 286 |
thymus | 100% | 6746.60 | 653 / 653 | 96% | 9.97 | 579 / 605 |
brain | 95% | 5238.05 | 2507 / 2642 | 99% | 14.29 | 699 / 705 |
pancreas | 98% | 2370.55 | 321 / 328 | 96% | 9.30 | 171 / 178 |
uterus | 100% | 7549.51 | 170 / 170 | 92% | 8.24 | 422 / 459 |
bladder | 100% | 5081.48 | 21 / 21 | 92% | 7.63 | 463 / 504 |
ovary | 99% | 2724.54 | 179 / 180 | 91% | 7.74 | 391 / 430 |
kidney | 93% | 1753.35 | 83 / 89 | 93% | 9.87 | 836 / 901 |
adrenal gland | 98% | 3531.21 | 254 / 258 | 86% | 6.81 | 198 / 230 |
skin | 100% | 4870.84 | 1800 / 1809 | 83% | 5.76 | 391 / 472 |
liver | 65% | 854.80 | 148 / 226 | 43% | 2.55 | 173 / 406 |
adipose | 100% | 8775.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4184.98 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2377.63 | 794 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 9.87 | 41 / 45 |
heart | 90% | 2597.63 | 773 / 861 | 0% | 0 | 0 / 0 |
spleen | 87% | 1273.29 | 209 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 48% | 3.26 | 14 / 29 |
eye | 0% | 0 | 0 / 0 | 43% | 1.92 | 34 / 80 |
peripheral blood | 17% | 297.12 | 161 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1902895 | Biological process | positive regulation of miRNA transcription |
GO_0045844 | Biological process | positive regulation of striated muscle tissue development |
GO_0051145 | Biological process | smooth muscle cell differentiation |
GO_0007517 | Biological process | muscle organ development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0045296 | Molecular function | cadherin binding |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | MRTFB |
Protein name | Myocardin-related transcription factor B (MRTF-B) (MKL/myocardin-like protein 2) (Megakaryoblastic leukemia 2) Myocardin related transcription factor B Phosphatase and actin regulator |
Synonyms | hCG_1982625 MKL2 KIAA1243 |
Description | FUNCTION: Acts as a transcriptional coactivator of serum response factor (SRF). Required for skeletal myogenic differentiation. . |
Accessions | I3L3Z7 I3L2S3 Q9ULH7 ENST00000571589.6 [Q9ULH7-5] ENST00000318282.9 [Q9ULH7-4] ENST00000574998.5 ENST00000573434.1 ENST00000571770.1 Q05BP1 A1L1A9 I3L0U1 ENST00000572567.5 ENST00000574045.5 [Q9ULH7-4] I3L2A0 ENST00000573051.1 [Q9ULH7-2] |