Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 12 studies | 28% ± 7% | |
CD16-positive, CD56-dim natural killer cell, human | 8 studies | 18% ± 2% | |
CD16-negative, CD56-bright natural killer cell, human | 7 studies | 17% ± 1% | |
natural killer cell | 7 studies | 20% ± 4% | |
microglial cell | 7 studies | 27% ± 9% | |
endothelial cell | 7 studies | 25% ± 5% | |
respiratory goblet cell | 6 studies | 30% ± 9% | |
adipocyte | 6 studies | 22% ± 6% | |
GABAergic neuron | 6 studies | 31% ± 17% | |
glutamatergic neuron | 6 studies | 39% ± 22% | |
epithelial cell | 5 studies | 46% ± 16% | |
fibroblast | 5 studies | 20% ± 4% | |
astrocyte | 5 studies | 34% ± 19% | |
dendritic cell | 5 studies | 19% ± 6% | |
macrophage | 5 studies | 24% ± 6% | |
club cell | 4 studies | 24% ± 9% | |
retinal pigment epithelial cell | 4 studies | 27% ± 11% | |
endothelial cell of lymphatic vessel | 4 studies | 21% ± 1% | |
interneuron | 4 studies | 41% ± 22% | |
oligodendrocyte | 4 studies | 32% ± 13% | |
secretory cell | 3 studies | 30% ± 9% | |
classical monocyte | 3 studies | 20% ± 3% | |
B cell | 3 studies | 18% ± 1% | |
myeloid cell | 3 studies | 20% ± 1% | |
basal cell | 3 studies | 39% ± 5% | |
mucus secreting cell | 3 studies | 24% ± 6% | |
cardiac muscle cell | 3 studies | 31% ± 0% | |
oligodendrocyte precursor cell | 3 studies | 30% ± 10% | |
CD8-positive, alpha-beta T cell | 3 studies | 18% ± 0% | |
pancreatic A cell | 3 studies | 27% ± 9% | |
monocyte | 3 studies | 22% ± 3% | |
type I pneumocyte | 3 studies | 19% ± 2% | |
type II pneumocyte | 3 studies | 21% ± 4% | |
lymphocyte | 3 studies | 27% ± 6% | |
brush cell | 3 studies | 20% ± 5% | |
neuron | 3 studies | 38% ± 28% | |
plasmacytoid dendritic cell | 3 studies | 17% ± 2% | |
epithelial cell of proximal tubule | 3 studies | 40% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2148.36 | 1444 / 1445 | 100% | 20.92 | 183 / 183 |
pancreas | 100% | 3008.91 | 328 / 328 | 99% | 22.58 | 177 / 178 |
liver | 100% | 7726.46 | 226 / 226 | 99% | 27.74 | 403 / 406 |
breast | 100% | 1830.93 | 459 / 459 | 99% | 18.28 | 1109 / 1118 |
prostate | 100% | 2137.02 | 245 / 245 | 99% | 16.79 | 497 / 502 |
lung | 99% | 1898.85 | 575 / 578 | 99% | 18.22 | 1148 / 1155 |
kidney | 100% | 4173.02 | 89 / 89 | 99% | 26.08 | 890 / 901 |
thymus | 100% | 2580.61 | 653 / 653 | 98% | 17.13 | 595 / 605 |
stomach | 100% | 3249.97 | 359 / 359 | 98% | 15.17 | 281 / 286 |
intestine | 100% | 3029.29 | 966 / 966 | 98% | 15.11 | 514 / 527 |
uterus | 100% | 1560.83 | 170 / 170 | 96% | 14.89 | 442 / 459 |
ovary | 100% | 1371.58 | 180 / 180 | 95% | 10.21 | 410 / 430 |
bladder | 100% | 1645.43 | 21 / 21 | 94% | 11.47 | 476 / 504 |
adrenal gland | 100% | 3447.13 | 258 / 258 | 87% | 9.21 | 200 / 230 |
brain | 95% | 931.92 | 2523 / 2642 | 90% | 6.03 | 632 / 705 |
skin | 100% | 1453.85 | 1807 / 1809 | 74% | 5.52 | 347 / 472 |
adipose | 100% | 1566.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2000.78 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2028.72 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1545.00 | 1332 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 2075.57 | 912 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 13.34 | 44 / 45 |
heart | 94% | 1175.45 | 810 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 7.54 | 26 / 29 |
eye | 0% | 0 | 0 / 0 | 26% | 1.49 | 21 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0035459 | Biological process | vesicle cargo loading |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0009306 | Biological process | protein secretion |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0070971 | Cellular component | endoplasmic reticulum exit site |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | MIA2 |
Protein name | CTAGE5 protein MIA SH3 domain ER export factor 2 MIA2 protein Melanoma inhibitory activity protein 2 (MIA protein 2) (CTAGE family member 5 ER export factor) (Cutaneous T-cell lymphoma-associated antigen 5) (Meningioma-expressed antigen 6/11) |
Synonyms | MGEA6 CTAGE5 MEA11 MEA6 MGEA11 |
Description | FUNCTION: Plays a role in the transport of cargos that are too large to fit into COPII-coated vesicles and require specific mechanisms to be incorporated into membrane-bound carriers and exported from the endoplasmic reticulum . Plays a role in the secretion of lipoproteins, pre-chylomicrons and pre-VLDLs, by participating in their export from the endoplasmic reticulum . Thereby, may play a role in cholesterol and triglyceride homeostasis (By similarity). Required for collagen VII (COL7A1) secretion by loading COL7A1 into transport carriers and recruiting PREB/SEC12 at the endoplasmic reticulum exit sites . . |
Accessions | ENST00000553728.1 Q96PC5 Q05BM1 ENST00000341502.9 [Q96PC5-10] ENST00000554392.5 Q4G155 ENST00000348007.7 [Q96PC5-8] ENST00000341749.7 [Q96PC5-14] ENST00000557148.5 ENST00000557038.5 [Q96PC5-11] ENST00000555716.5 G3V3C4 ENST00000280082.4 [Q96PC5-2] ENST00000396165.8 [Q96PC5-9] ENST00000640607.2 [Q96PC5-3] ENST00000553352.1 [Q96PC5-9] ENST00000556148.5 [Q96PC5-13] G3V4M1 ENST00000396158.6 [Q96PC5-12] ENST00000280083.7 [Q96PC5-7] Q6PIE7 G3V599 G3V5K6 |