Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 12 studies | 25% ± 9% | |
| glutamatergic neuron | 10 studies | 42% ± 25% | |
| GABAergic neuron | 7 studies | 47% ± 19% | |
| oligodendrocyte | 7 studies | 28% ± 7% | |
| oligodendrocyte precursor cell | 7 studies | 30% ± 12% | |
| neuron | 5 studies | 35% ± 15% | |
| amacrine cell | 5 studies | 25% ± 7% | |
| retina horizontal cell | 5 studies | 23% ± 5% | |
| astrocyte | 5 studies | 25% ± 5% | |
| microglial cell | 5 studies | 22% ± 6% | |
| interneuron | 5 studies | 47% ± 19% | |
| epithelial cell | 4 studies | 39% ± 10% | |
| retinal bipolar neuron | 4 studies | 16% ± 0% | |
| endothelial cell of lymphatic vessel | 4 studies | 23% ± 5% | |
| erythrocyte | 4 studies | 47% ± 20% | |
| macrophage | 4 studies | 22% ± 7% | |
| mast cell | 4 studies | 20% ± 2% | |
| retinal ganglion cell | 3 studies | 27% ± 3% | |
| fibroblast | 3 studies | 26% ± 9% | |
| lymphocyte | 3 studies | 21% ± 6% | |
| GABAergic amacrine cell | 3 studies | 30% ± 6% | |
| glycinergic amacrine cell | 3 studies | 26% ± 2% | |
| rod bipolar cell | 3 studies | 22% ± 5% | |
| club cell | 3 studies | 18% ± 1% | |
| type I pneumocyte | 3 studies | 18% ± 4% | |
| basal cell | 3 studies | 27% ± 13% | |
| goblet cell | 3 studies | 34% ± 23% | |
| granule cell | 3 studies | 31% ± 7% | |
| hepatocyte | 3 studies | 40% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 1636.76 | 459 / 459 | 100% | 58.09 | 1118 / 1118 |
| esophagus | 100% | 2057.79 | 1445 / 1445 | 100% | 30.32 | 183 / 183 |
| liver | 100% | 2539.84 | 226 / 226 | 100% | 37.02 | 406 / 406 |
| ovary | 100% | 2218.81 | 180 / 180 | 100% | 22.69 | 430 / 430 |
| pancreas | 100% | 2682.58 | 328 / 328 | 100% | 31.36 | 178 / 178 |
| prostate | 100% | 1899.17 | 245 / 245 | 100% | 63.92 | 502 / 502 |
| thymus | 100% | 1948.70 | 653 / 653 | 100% | 43.57 | 605 / 605 |
| uterus | 100% | 1610.52 | 170 / 170 | 100% | 31.02 | 459 / 459 |
| lung | 100% | 1713.78 | 578 / 578 | 100% | 32.30 | 1154 / 1155 |
| bladder | 100% | 1429.43 | 21 / 21 | 100% | 31.76 | 503 / 504 |
| brain | 100% | 1946.38 | 2632 / 2642 | 100% | 35.15 | 705 / 705 |
| intestine | 100% | 1670.77 | 966 / 966 | 100% | 28.84 | 525 / 527 |
| adrenal gland | 100% | 2817.60 | 258 / 258 | 100% | 35.36 | 229 / 230 |
| skin | 100% | 1721.26 | 1808 / 1809 | 99% | 30.38 | 469 / 472 |
| stomach | 100% | 1714.93 | 359 / 359 | 99% | 28.56 | 284 / 286 |
| kidney | 100% | 1194.37 | 89 / 89 | 98% | 28.43 | 886 / 901 |
| adipose | 100% | 1665.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 30.87 | 29 / 29 |
| muscle | 100% | 3373.24 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1712.48 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 33.06 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 18.80 | 1 / 1 |
| blood vessel | 100% | 1605.60 | 1333 / 1335 | 0% | 0 | 0 / 0 |
| heart | 97% | 1028.74 | 836 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 97% | 1065.03 | 897 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 95% | 16.67 | 76 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0007420 | Biological process | brain development |
| GO_0023041 | Biological process | neuronal signal transduction |
| GO_0006935 | Biological process | chemotaxis |
| GO_0030424 | Cellular component | axon |
| GO_0045202 | Cellular component | synapse |
| GO_0031965 | Cellular component | nuclear membrane |
| GO_0044306 | Cellular component | neuron projection terminus |
| GO_0030867 | Cellular component | rough endoplasmic reticulum membrane |
| GO_0005634 | Cellular component | nucleus |
| GO_0008017 | Molecular function | microtubule binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003674 | Molecular function | molecular_function |
| Gene name | MACO1 |
| Protein name | Macoilin (Transmembrane protein 57) Macoilin (Macoilin-1) (Transmembrane protein 57) |
| Synonyms | TMEM57 |
| Description | FUNCTION: Plays a role in the regulation of neuronal activity. . FUNCTION: Plays a role in the regulation of neuronal activity. . |
| Accessions | ENST00000374343.5 [Q8N5G2-1] Q8N5G2 ENST00000647928.1 ENST00000399766.7 [Q8N5G2-3] A0A3B3ITD2 |