Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 35% ± 17% | |
glutamatergic neuron | 10 studies | 42% ± 25% | |
oligodendrocyte precursor cell | 10 studies | 30% ± 13% | |
astrocyte | 10 studies | 32% ± 15% | |
microglial cell | 8 studies | 31% ± 12% | |
endothelial cell of lymphatic vessel | 8 studies | 39% ± 20% | |
GABAergic neuron | 8 studies | 46% ± 23% | |
oligodendrocyte | 7 studies | 30% ± 11% | |
pericyte | 6 studies | 22% ± 7% | |
interneuron | 6 studies | 47% ± 24% | |
macrophage | 6 studies | 32% ± 6% | |
epithelial cell | 6 studies | 30% ± 16% | |
neuron | 5 studies | 39% ± 14% | |
ciliated cell | 5 studies | 22% ± 7% | |
type I pneumocyte | 5 studies | 26% ± 9% | |
granule cell | 4 studies | 26% ± 4% | |
retinal ganglion cell | 4 studies | 31% ± 13% | |
capillary endothelial cell | 4 studies | 36% ± 13% | |
cardiac muscle cell | 4 studies | 19% ± 2% | |
monocyte | 4 studies | 23% ± 1% | |
club cell | 4 studies | 23% ± 8% | |
fibroblast | 4 studies | 24% ± 7% | |
smooth muscle cell | 4 studies | 19% ± 1% | |
type II pneumocyte | 4 studies | 21% ± 7% | |
GABAergic interneuron | 3 studies | 35% ± 5% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 0% | |
dendritic cell | 3 studies | 17% ± 2% | |
vein endothelial cell | 3 studies | 42% ± 25% | |
GABAergic amacrine cell | 3 studies | 24% ± 10% | |
amacrine cell | 3 studies | 26% ± 15% | |
glycinergic amacrine cell | 3 studies | 22% ± 4% | |
endothelial cell of vascular tree | 3 studies | 45% ± 22% | |
hepatocyte | 3 studies | 45% ± 22% | |
abnormal cell | 3 studies | 33% ± 13% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 24% ± 7% | |
T cell | 3 studies | 21% ± 4% | |
alveolar macrophage | 3 studies | 30% ± 6% | |
lymphocyte | 3 studies | 31% ± 12% | |
basal cell | 3 studies | 35% ± 21% | |
transit amplifying cell | 3 studies | 37% ± 27% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1835.95 | 1445 / 1445 | 100% | 16.74 | 183 / 183 |
lung | 100% | 2144.50 | 578 / 578 | 100% | 15.73 | 1155 / 1155 |
stomach | 100% | 1954.36 | 359 / 359 | 100% | 16.61 | 286 / 286 |
brain | 100% | 2598.16 | 2641 / 2642 | 100% | 22.21 | 704 / 705 |
ovary | 100% | 2583.18 | 180 / 180 | 100% | 15.14 | 429 / 430 |
breast | 100% | 2458.07 | 459 / 459 | 100% | 19.89 | 1115 / 1118 |
intestine | 100% | 1790.68 | 966 / 966 | 100% | 16.60 | 525 / 527 |
prostate | 100% | 2031.61 | 245 / 245 | 99% | 16.47 | 499 / 502 |
thymus | 100% | 2499.18 | 653 / 653 | 99% | 17.35 | 600 / 605 |
adrenal gland | 100% | 5333.69 | 258 / 258 | 99% | 19.08 | 227 / 230 |
kidney | 100% | 1675.61 | 89 / 89 | 99% | 15.58 | 889 / 901 |
bladder | 100% | 2055.86 | 21 / 21 | 99% | 13.25 | 497 / 504 |
pancreas | 100% | 1014.04 | 327 / 328 | 99% | 12.74 | 176 / 178 |
uterus | 100% | 2718.09 | 170 / 170 | 98% | 12.30 | 452 / 459 |
skin | 100% | 2073.36 | 1808 / 1809 | 96% | 14.88 | 452 / 472 |
liver | 100% | 1120.41 | 226 / 226 | 90% | 6.95 | 366 / 406 |
adipose | 100% | 2369.64 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1876.62 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1257.16 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 10.62 | 45 / 45 |
muscle | 100% | 1345.96 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1405.65 | 850 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 6.81 | 28 / 29 |
peripheral blood | 88% | 1274.21 | 814 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 78% | 5.07 | 62 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0042733 | Biological process | embryonic digit morphogenesis |
GO_0005886 | Cellular component | plasma membrane |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | LMBR1 |
Protein name | Limb development membrane protein 1 Limb region 1 protein homolog (Differentiation-related gene 14 protein) |
Synonyms | DIF14 C7orf2 |
Description | FUNCTION: Putative membrane receptor. |
Accessions | ENST00000448926.5 F8WDW0 F8WEK4 ENST00000444719.5 H7C1Y4 F8WEN8 ENST00000434453.1 F8WCL1 H0Y6V6 F2Z2Z3 Q8WVP7 ENST00000415428.5 F8WB14 ENST00000434278.5 ENST00000434503.5 ENST00000414218.1 ENST00000353442.10 [Q8WVP7-1] ENST00000454132.5 |