Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 3 studies | 24% ± 11% | |
dendritic cell | 3 studies | 19% ± 2% |
Insufficient scRNA-seq data for expression of LIMK1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 2416.80 | 1807 / 1809 | 100% | 50.84 | 472 / 472 |
brain | 100% | 6486.37 | 2638 / 2642 | 100% | 46.93 | 705 / 705 |
thymus | 100% | 1911.36 | 652 / 653 | 100% | 36.61 | 605 / 605 |
ovary | 99% | 1981.88 | 179 / 180 | 100% | 33.98 | 430 / 430 |
stomach | 100% | 1118.33 | 358 / 359 | 100% | 26.00 | 285 / 286 |
lung | 99% | 2125.02 | 574 / 578 | 100% | 42.79 | 1155 / 1155 |
esophagus | 99% | 1241.16 | 1429 / 1445 | 100% | 37.24 | 183 / 183 |
uterus | 99% | 1935.06 | 169 / 170 | 99% | 32.14 | 456 / 459 |
bladder | 100% | 1627.29 | 21 / 21 | 99% | 28.46 | 497 / 504 |
intestine | 99% | 1359.49 | 958 / 966 | 99% | 26.51 | 524 / 527 |
breast | 99% | 1578.22 | 454 / 459 | 100% | 29.98 | 1113 / 1118 |
prostate | 100% | 2032.79 | 245 / 245 | 98% | 15.21 | 494 / 502 |
kidney | 98% | 1398.46 | 87 / 89 | 97% | 20.39 | 874 / 901 |
adrenal gland | 99% | 1578.17 | 255 / 258 | 93% | 28.21 | 215 / 230 |
pancreas | 92% | 983.48 | 303 / 328 | 98% | 30.10 | 175 / 178 |
eye | 0% | 0 | 0 / 0 | 100% | 31.15 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 61.75 | 29 / 29 |
spleen | 100% | 3355.32 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.47 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.67 | 1 / 1 |
adipose | 99% | 1562.27 | 1193 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 2816.05 | 878 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 90% | 967.37 | 1195 / 1335 | 0% | 0 | 0 / 0 |
muscle | 89% | 2195.60 | 717 / 803 | 0% | 0 | 0 / 0 |
heart | 87% | 838.73 | 749 / 861 | 0% | 0 | 0 / 0 |
liver | 23% | 195.21 | 51 / 226 | 47% | 8.17 | 191 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045773 | Biological process | positive regulation of axon extension |
GO_0051496 | Biological process | positive regulation of stress fiber assembly |
GO_0007165 | Biological process | signal transduction |
GO_0032233 | Biological process | positive regulation of actin filament bundle assembly |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0048675 | Biological process | axon extension |
GO_0007266 | Biological process | Rho protein signal transduction |
GO_0043149 | Biological process | stress fiber assembly |
GO_0006468 | Biological process | protein phosphorylation |
GO_0051444 | Biological process | negative regulation of ubiquitin-protein transferase activity |
GO_0007399 | Biological process | nervous system development |
GO_0038096 | Biological process | Fc-gamma receptor signaling pathway involved in phagocytosis |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0005856 | Cellular component | cytoskeleton |
GO_0016020 | Cellular component | membrane |
GO_0016607 | Cellular component | nuclear speck |
GO_0098794 | Cellular component | postsynapse |
GO_0043005 | Cellular component | neuron projection |
GO_0005925 | Cellular component | focal adhesion |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0001673 | Cellular component | male germ cell nucleus |
GO_0030027 | Cellular component | lamellipodium |
GO_0005634 | Cellular component | nucleus |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0031072 | Molecular function | heat shock protein binding |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0004672 | Molecular function | protein kinase activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | LIMK1 |
Protein name | non-specific serine/threonine protein kinase (EC 2.7.11.1) LIM domain kinase 1 (LIMK-1) (EC 2.7.11.1) Uncharacterized protein LIMK1 LIM domain kinase 1 (EC 2.7.11.1) |
Synonyms | LIMK |
Description | FUNCTION: Serine/threonine-protein kinase that plays an essential role in the regulation of actin filament dynamics. Acts downstream of several Rho family GTPase signal transduction pathways . Activated by upstream kinases including ROCK1, PAK1 and PAK4, which phosphorylate LIMK1 on a threonine residue located in its activation loop . LIMK1 subsequently phosphorylates and inactivates the actin binding/depolymerizing factors cofilin-1/CFL1, cofilin-2/CFL2 and destrin/DSTN, thereby preventing the cleavage of filamentous actin (F-actin), and stabilizing the actin cytoskeleton . In this way LIMK1 regulates several actin-dependent biological processes including cell motility, cell cycle progression, and differentiation . Phosphorylates TPPP on serine residues, thereby promoting microtubule disassembly . Stimulates axonal outgrowth and may be involved in brain development . .; FUNCTION: [Isoform 3]: Has a dominant negative effect on actin cytoskeletal changes. Required for atypical chemokine receptor ACKR2-induced phosphorylation of cofilin (CFL1). . |
Accessions | E9PC47 ENST00000538333.3 [P53667-4] P53667 Q75MU0 Q75MU4 ENST00000336180.7 [P53667-1] ENST00000435201.5 [P53667-3] ENST00000418310.5 |