Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 30% ± 12% | |
astrocyte | 13 studies | 39% ± 17% | |
microglial cell | 13 studies | 32% ± 14% | |
oligodendrocyte | 12 studies | 39% ± 14% | |
glutamatergic neuron | 11 studies | 45% ± 25% | |
GABAergic neuron | 10 studies | 48% ± 23% | |
oligodendrocyte precursor cell | 10 studies | 37% ± 12% | |
fibroblast | 10 studies | 32% ± 11% | |
macrophage | 8 studies | 28% ± 10% | |
smooth muscle cell | 8 studies | 30% ± 10% | |
pericyte | 7 studies | 32% ± 12% | |
adipocyte | 7 studies | 26% ± 6% | |
neuron | 6 studies | 39% ± 16% | |
epithelial cell | 6 studies | 35% ± 16% | |
interneuron | 6 studies | 54% ± 22% | |
endothelial cell of lymphatic vessel | 5 studies | 29% ± 6% | |
type I pneumocyte | 5 studies | 46% ± 8% | |
type II pneumocyte | 5 studies | 32% ± 7% | |
granule cell | 4 studies | 28% ± 6% | |
cardiac muscle cell | 4 studies | 18% ± 1% | |
mast cell | 4 studies | 19% ± 3% | |
amacrine cell | 4 studies | 26% ± 4% | |
club cell | 4 studies | 37% ± 15% | |
monocyte | 4 studies | 19% ± 2% | |
GABAergic interneuron | 3 studies | 42% ± 8% | |
progenitor cell | 3 studies | 34% ± 5% | |
retinal bipolar neuron | 3 studies | 26% ± 7% | |
GABAergic amacrine cell | 3 studies | 28% ± 9% | |
Mueller cell | 3 studies | 27% ± 6% | |
glycinergic amacrine cell | 3 studies | 26% ± 5% | |
retina horizontal cell | 3 studies | 24% ± 5% | |
retinal ganglion cell | 3 studies | 33% ± 12% | |
retinal rod cell | 3 studies | 24% ± 2% | |
rod bipolar cell | 3 studies | 34% ± 16% | |
retinal pigment epithelial cell | 3 studies | 37% ± 15% | |
ependymal cell | 3 studies | 32% ± 10% | |
T cell | 3 studies | 24% ± 6% | |
ciliated cell | 3 studies | 30% ± 9% | |
lymphocyte | 3 studies | 22% ± 5% | |
basal cell | 3 studies | 36% ± 19% | |
mesothelial cell | 3 studies | 37% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 612.77 | 2638 / 2642 | 100% | 2.94 | 705 / 705 |
breast | 100% | 855.03 | 459 / 459 | 96% | 2.88 | 1071 / 1118 |
prostate | 100% | 754.15 | 245 / 245 | 95% | 2.13 | 478 / 502 |
thymus | 100% | 979.15 | 653 / 653 | 94% | 2.20 | 569 / 605 |
ovary | 100% | 1568.38 | 180 / 180 | 89% | 2.28 | 382 / 430 |
lung | 100% | 769.66 | 577 / 578 | 88% | 1.98 | 1020 / 1155 |
uterus | 100% | 1046.36 | 170 / 170 | 88% | 2.07 | 404 / 459 |
esophagus | 100% | 611.15 | 1443 / 1445 | 84% | 1.90 | 154 / 183 |
kidney | 100% | 558.48 | 89 / 89 | 83% | 2.20 | 749 / 901 |
adrenal gland | 99% | 453.65 | 256 / 258 | 78% | 2.10 | 179 / 230 |
pancreas | 96% | 265.42 | 316 / 328 | 79% | 1.37 | 141 / 178 |
skin | 100% | 784.47 | 1809 / 1809 | 72% | 1.37 | 339 / 472 |
stomach | 99% | 389.99 | 356 / 359 | 69% | 1.25 | 196 / 286 |
bladder | 100% | 713.14 | 21 / 21 | 67% | 1.32 | 340 / 504 |
intestine | 100% | 587.65 | 965 / 966 | 55% | 0.87 | 292 / 527 |
blood vessel | 100% | 853.94 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 536.07 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 745.05 | 1203 / 1204 | 0% | 0 | 0 / 0 |
liver | 66% | 125.37 | 149 / 226 | 33% | 0.56 | 134 / 406 |
muscle | 98% | 341.21 | 787 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 400.16 | 809 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 2.29 | 40 / 45 |
lymph node | 0% | 0 | 0 / 0 | 83% | 1.46 | 24 / 29 |
eye | 0% | 0 | 0 / 0 | 51% | 0.77 | 41 / 80 |
peripheral blood | 44% | 140.16 | 412 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005515 | Molecular function | protein binding |
Gene name | KIAA1328 |
Protein name | Protein hinderin KIAA1328 |
Synonyms | |
Description | FUNCTION: Competes with SMC1 for binding to SMC3. May affect the availability of SMC3 to engage in the formation of multimeric protein complexes. . |
Accessions | Q86T90 ENST00000591911.1 K7EM46 K7EP66 ENST00000592521.5 ENST00000590617.5 ENST00000280020.10 [Q86T90-1] ENST00000586501.1 [Q86T90-4] M0QYQ2 ENST00000586135.1 [Q86T90-3] ENST00000592611.5 K7EJ61 ENST00000591619.5 [Q86T90-2] ENST00000587139.5 |