Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 27% ± 9% | |
fibroblast | 12 studies | 20% ± 5% | |
microglial cell | 8 studies | 25% ± 8% | |
epithelial cell | 8 studies | 36% ± 20% | |
pericyte | 8 studies | 22% ± 6% | |
basal cell | 7 studies | 31% ± 15% | |
ciliated cell | 7 studies | 28% ± 9% | |
macrophage | 7 studies | 29% ± 8% | |
GABAergic neuron | 7 studies | 33% ± 20% | |
endothelial cell of lymphatic vessel | 6 studies | 29% ± 11% | |
astrocyte | 6 studies | 29% ± 10% | |
glutamatergic neuron | 6 studies | 43% ± 24% | |
oligodendrocyte | 6 studies | 23% ± 7% | |
neuron | 5 studies | 34% ± 14% | |
club cell | 5 studies | 22% ± 7% | |
adipocyte | 5 studies | 24% ± 4% | |
dendritic cell | 5 studies | 27% ± 20% | |
lymphocyte | 5 studies | 24% ± 7% | |
monocyte | 5 studies | 24% ± 3% | |
smooth muscle cell | 5 studies | 29% ± 22% | |
B cell | 4 studies | 23% ± 5% | |
myeloid cell | 4 studies | 25% ± 2% | |
cardiac muscle cell | 4 studies | 18% ± 1% | |
natural killer cell | 4 studies | 24% ± 6% | |
type I pneumocyte | 4 studies | 22% ± 6% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 9% | |
interneuron | 4 studies | 38% ± 22% | |
classical monocyte | 3 studies | 29% ± 9% | |
non-classical monocyte | 3 studies | 34% ± 16% | |
plasma cell | 3 studies | 29% ± 11% | |
mast cell | 3 studies | 20% ± 4% | |
secretory cell | 3 studies | 25% ± 12% | |
hepatocyte | 3 studies | 34% ± 24% | |
type II pneumocyte | 3 studies | 20% ± 5% | |
pancreatic A cell | 3 studies | 29% ± 11% | |
pancreatic ductal cell | 3 studies | 34% ± 11% | |
abnormal cell | 3 studies | 26% ± 12% | |
leukocyte | 3 studies | 21% ± 3% | |
myofibroblast cell | 3 studies | 22% ± 4% | |
alveolar macrophage | 3 studies | 25% ± 9% | |
transit amplifying cell | 3 studies | 32% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3529.65 | 459 / 459 | 100% | 30.87 | 1118 / 1118 |
esophagus | 100% | 4172.39 | 1445 / 1445 | 100% | 32.40 | 183 / 183 |
intestine | 100% | 3830.67 | 966 / 966 | 100% | 29.80 | 527 / 527 |
lung | 100% | 3609.73 | 578 / 578 | 100% | 33.99 | 1155 / 1155 |
ovary | 100% | 2802.74 | 180 / 180 | 100% | 27.98 | 430 / 430 |
pancreas | 100% | 4161.82 | 328 / 328 | 100% | 26.63 | 178 / 178 |
stomach | 100% | 2788.55 | 359 / 359 | 100% | 27.36 | 286 / 286 |
uterus | 100% | 3275.61 | 170 / 170 | 100% | 35.50 | 459 / 459 |
bladder | 100% | 3839.81 | 21 / 21 | 100% | 30.10 | 503 / 504 |
prostate | 100% | 3335.80 | 245 / 245 | 100% | 23.79 | 501 / 502 |
liver | 100% | 1911.25 | 226 / 226 | 100% | 18.13 | 405 / 406 |
skin | 100% | 3551.08 | 1808 / 1809 | 100% | 27.53 | 471 / 472 |
brain | 100% | 3040.95 | 2631 / 2642 | 100% | 24.66 | 705 / 705 |
thymus | 100% | 3181.67 | 653 / 653 | 100% | 26.27 | 602 / 605 |
kidney | 100% | 2600.08 | 89 / 89 | 99% | 20.40 | 890 / 901 |
adrenal gland | 100% | 2487.78 | 258 / 258 | 97% | 17.56 | 222 / 230 |
adipose | 100% | 3794.70 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3863.22 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 26.65 | 29 / 29 |
muscle | 100% | 10028.05 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2953.54 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 34.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.77 | 1 / 1 |
peripheral blood | 99% | 3725.21 | 923 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 20.38 | 79 / 80 |
heart | 98% | 3012.26 | 842 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0099536 | Biological process | synaptic signaling |
GO_0070534 | Biological process | protein K63-linked ubiquitination |
GO_0070936 | Biological process | protein K48-linked ubiquitination |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | KCMF1 |
Protein name | E3 ubiquitin-protein ligase KCMF1 (EC 2.3.2.27) (FGF-induced in gastric cancer) (Potassium channel modulatory factor) (PCMF) (RING-type E3 ubiquitin transferase KCMF1) (ZZ-type zinc finger-containing protein 1) Potassium channel modulatory factor 1 |
Synonyms | ZZZ1 FIGC |
Description | FUNCTION: Has intrinsic E3 ubiquitin ligase activity and promotes ubiquitination. . |
Accessions | C9J3I2 ENST00000456682.1 C9JSW5 A0A1D5RMQ3 ENST00000409785.9 Q9P0J7 ENST00000453448.1 ENST00000428691.5 |