Insufficient scRNA-seq data for expression of IRX4 at single-cell level.
Insufficient scRNA-seq data for expression of IRX4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 81% | 1196.98 | 199 / 245 | 88% | 22.37 | 443 / 502 |
esophagus | 38% | 585.59 | 556 / 1445 | 54% | 26.24 | 99 / 183 |
breast | 54% | 420.02 | 246 / 459 | 30% | 3.61 | 337 / 1118 |
skin | 72% | 1540.26 | 1304 / 1809 | 4% | 0.57 | 19 / 472 |
tonsil | 0% | 0 | 0 / 0 | 58% | 10.45 | 26 / 45 |
heart | 46% | 469.66 | 393 / 861 | 0% | 0 | 0 / 0 |
uterus | 1% | 15.14 | 2 / 170 | 33% | 11.45 | 153 / 459 |
lung | 0% | 0 | 0 / 578 | 21% | 5.14 | 246 / 1155 |
bladder | 0% | 0 | 0 / 21 | 10% | 1.48 | 50 / 504 |
thymus | 0% | 0 | 0 / 653 | 7% | 2.16 | 41 / 605 |
adrenal gland | 0% | 0 | 0 / 258 | 6% | 12.92 | 13 / 230 |
muscle | 3% | 8.43 | 22 / 803 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 2% | 0.15 | 4 / 178 |
intestine | 0% | 0 | 0 / 966 | 2% | 0.21 | 11 / 527 |
adipose | 2% | 7.27 | 25 / 1204 | 0% | 0 | 0 / 0 |
stomach | 0% | 0 | 0 / 359 | 1% | 0.12 | 3 / 286 |
ovary | 0% | 0 | 0 / 180 | 1% | 0.03 | 3 / 430 |
brain | 0% | 0.07 | 1 / 2642 | 1% | 0.14 | 4 / 705 |
kidney | 0% | 0 | 0 / 89 | 0% | 0.03 | 4 / 901 |
blood vessel | 0% | 2.20 | 5 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0 | 0 / 406 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030182 | Biological process | neuron differentiation |
GO_0048561 | Biological process | establishment of animal organ orientation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0048468 | Biological process | cell development |
GO_0007507 | Biological process | heart development |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | IRX4 |
Protein name | Iroquois homeobox 4 Iroquois-class homeodomain protein IRX-4 (Homeodomain protein IRXA3) (Iroquois homeobox protein 4) |
Synonyms | IRXA3 |
Description | FUNCTION: Likely to be an important mediator of ventricular differentiation during cardiac development. |
Accessions | ENST00000513692.5 [P78413-1] P78413 ENST00000508261.5 ENST00000231357.7 [P78413-1] D6RC00 ENST00000505790.5 [P78413-1] D6RAS8 ENST00000613726.4 [P78413-2] ENST00000622814.4 [P78413-2] ENST00000511126.1 |