Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 34 studies | 46% ± 23% | |
smooth muscle cell | 14 studies | 31% ± 17% | |
connective tissue cell | 14 studies | 48% ± 22% | |
pericyte | 11 studies | 29% ± 11% | |
mesothelial cell | 9 studies | 36% ± 16% | |
basal cell | 8 studies | 33% ± 15% | |
endothelial cell | 5 studies | 27% ± 5% | |
myofibroblast cell | 5 studies | 45% ± 24% | |
adventitial cell | 4 studies | 81% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 98% | 11814.26 | 240 / 245 | 91% | 87.43 | 459 / 502 |
thymus | 81% | 5017.73 | 526 / 653 | 85% | 449.39 | 514 / 605 |
uterus | 96% | 10918.82 | 163 / 170 | 61% | 73.59 | 279 / 459 |
ovary | 98% | 10533.62 | 176 / 180 | 52% | 28.87 | 223 / 430 |
bladder | 90% | 10403.57 | 19 / 21 | 56% | 68.43 | 283 / 504 |
esophagus | 79% | 10186.98 | 1144 / 1445 | 67% | 91.44 | 123 / 183 |
breast | 94% | 13272.76 | 431 / 459 | 48% | 21.24 | 540 / 1118 |
intestine | 76% | 4997.74 | 730 / 966 | 44% | 27.20 | 232 / 527 |
kidney | 38% | 1987.82 | 34 / 89 | 81% | 171.24 | 728 / 901 |
stomach | 55% | 4471.17 | 197 / 359 | 53% | 26.76 | 151 / 286 |
skin | 61% | 4363.16 | 1101 / 1809 | 40% | 25.35 | 191 / 472 |
adrenal gland | 70% | 3947.01 | 181 / 258 | 30% | 20.62 | 70 / 230 |
lung | 52% | 2678.16 | 300 / 578 | 48% | 40.96 | 553 / 1155 |
blood vessel | 100% | 19888.32 | 1332 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 12051.64 | 1165 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 3% | 118.99 | 11 / 328 | 93% | 130.43 | 165 / 178 |
spleen | 62% | 3482.47 | 150 / 241 | 0% | 0 | 0 / 0 |
heart | 61% | 3717.00 | 521 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 51% | 89.67 | 23 / 45 |
brain | 2% | 65.61 | 40 / 2642 | 28% | 17.31 | 199 / 705 |
eye | 0% | 0 | 0 / 0 | 21% | 9.32 | 17 / 80 |
lymph node | 0% | 0 | 0 / 0 | 21% | 11.17 | 6 / 29 |
muscle | 18% | 647.18 | 148 / 803 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 11% | 5.72 | 44 / 406 |
peripheral blood | 0% | 2.70 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0032874 | Biological process | positive regulation of stress-activated MAPK cascade |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0016477 | Biological process | cell migration |
GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
GO_0043567 | Biological process | regulation of insulin-like growth factor receptor signaling pathway |
GO_0042568 | Cellular component | insulin-like growth factor binary complex |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0031995 | Molecular function | insulin-like growth factor II binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0001968 | Molecular function | fibronectin binding |
GO_0005515 | Molecular function | protein binding |
GO_0031994 | Molecular function | insulin-like growth factor I binding |
Gene name | IGFBP6 |
Protein name | Insulin like growth factor binding protein 6 Insulin-like growth factor-binding protein 6 (IBP-6) (IGF-binding protein 6) (IGFBP-6) Insulin-like growth factor binding protein 6 |
Synonyms | IBP6 |
Description | FUNCTION: IGF-binding proteins prolong the half-life of the IGFs and have been shown to either inhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter the interaction of IGFs with their cell surface receptors. Activates the MAPK signaling pathway and induces cell migration . . |
Accessions | ENST00000301464.4 ENST00000548547.5 ENST00000549628.1 P24592 Q9H2B5 F8VVA5 A0A3B3IUE0 ENST00000548176.1 ENST00000650247.1 F8VYK9 |