Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 25 studies | 32% ± 20% | |
endothelial cell | 19 studies | 30% ± 14% | |
endothelial cell of artery | 12 studies | 54% ± 15% | |
basal cell | 11 studies | 31% ± 18% | |
epithelial cell | 10 studies | 42% ± 17% | |
secretory cell | 8 studies | 40% ± 17% | |
pericyte | 8 studies | 32% ± 15% | |
respiratory goblet cell | 6 studies | 38% ± 15% | |
connective tissue cell | 6 studies | 44% ± 19% | |
ciliated cell | 4 studies | 32% ± 9% | |
capillary endothelial cell | 4 studies | 29% ± 10% | |
club cell | 3 studies | 39% ± 14% | |
squamous epithelial cell | 3 studies | 40% ± 22% | |
hepatic stellate cell | 3 studies | 23% ± 4% | |
smooth muscle cell | 3 studies | 23% ± 5% | |
extravillous trophoblast | 3 studies | 69% ± 14% | |
myofibroblast cell | 3 studies | 24% ± 5% | |
endothelial cell of vascular tree | 3 studies | 21% ± 7% | |
enteroendocrine cell | 3 studies | 36% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 10729.62 | 21 / 21 | 81% | 592.33 | 406 / 504 |
uterus | 99% | 34165.42 | 169 / 170 | 78% | 382.96 | 360 / 459 |
ovary | 97% | 23903.73 | 174 / 180 | 68% | 125.10 | 291 / 430 |
breast | 100% | 31160.98 | 459 / 459 | 64% | 99.23 | 717 / 1118 |
kidney | 69% | 5227.26 | 61 / 89 | 82% | 1202.77 | 736 / 901 |
liver | 99% | 23318.85 | 223 / 226 | 49% | 96.58 | 199 / 406 |
skin | 92% | 18708.04 | 1665 / 1809 | 54% | 299.13 | 257 / 472 |
intestine | 86% | 9165.75 | 830 / 966 | 54% | 104.58 | 287 / 527 |
prostate | 92% | 9753.22 | 225 / 245 | 41% | 50.69 | 208 / 502 |
lung | 51% | 3528.98 | 293 / 578 | 81% | 326.59 | 935 / 1155 |
esophagus | 58% | 3821.51 | 837 / 1445 | 60% | 145.05 | 109 / 183 |
stomach | 46% | 2643.95 | 166 / 359 | 59% | 122.41 | 169 / 286 |
thymus | 71% | 4272.12 | 465 / 653 | 31% | 61.26 | 185 / 605 |
ureter | 0% | 0 | 0 / 0 | 100% | 2306.54 | 1 / 1 |
adipose | 100% | 37072.26 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 22059.90 | 1329 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 2% | 80.66 | 7 / 328 | 93% | 434.45 | 165 / 178 |
heart | 92% | 14697.11 | 794 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 76% | 241.03 | 34 / 45 |
spleen | 63% | 4972.27 | 151 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 6% | 239.44 | 15 / 258 | 47% | 90.88 | 108 / 230 |
brain | 6% | 330.55 | 164 / 2642 | 35% | 99.00 | 250 / 705 |
muscle | 41% | 2865.15 | 329 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 7.73 | 2 / 29 |
peripheral blood | 0% | 31.68 | 4 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0014912 | Biological process | negative regulation of smooth muscle cell migration |
GO_0001558 | Biological process | regulation of cell growth |
GO_0000165 | Biological process | MAPK cascade |
GO_0009968 | Biological process | negative regulation of signal transduction |
GO_0001649 | Biological process | osteoblast differentiation |
GO_0045663 | Biological process | positive regulation of myoblast differentiation |
GO_0010906 | Biological process | regulation of glucose metabolic process |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_0043568 | Biological process | positive regulation of insulin-like growth factor receptor signaling pathway |
GO_0048662 | Biological process | negative regulation of smooth muscle cell proliferation |
GO_0006915 | Biological process | apoptotic process |
GO_0006468 | Biological process | protein phosphorylation |
GO_0044342 | Biological process | type B pancreatic cell proliferation |
GO_0043065 | Biological process | positive regulation of apoptotic process |
GO_0043567 | Biological process | regulation of insulin-like growth factor receptor signaling pathway |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0042567 | Cellular component | insulin-like growth factor ternary complex |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0016942 | Cellular component | insulin-like growth factor binding protein complex |
GO_0005634 | Cellular component | nucleus |
GO_0005520 | Molecular function | insulin-like growth factor binding |
GO_0001968 | Molecular function | fibronectin binding |
GO_0031994 | Molecular function | insulin-like growth factor I binding |
GO_0031995 | Molecular function | insulin-like growth factor II binding |
GO_0008160 | Molecular function | protein tyrosine phosphatase activator activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | IGFBP3 |
Protein name | Insulin like growth factor binding protein 3 (Insulin-like growth factor binding protein 3, isoform CRA_b) (cDNA FLJ43234 fis, clone HCHON2002964, highly similar to Insulin-like growth factor-binding protein 3) Insulin-like growth factor-binding protein 3 (IBP-3) (IGF-binding protein 3) (IGFBP-3) Insulin like growth factor binding protein 3 Insulin-like growth factor-binding protein 3 |
Synonyms | hCG_1735376 IBP3 |
Description | FUNCTION: IGF-binding proteins prolong the half-life of the IGFs and have been shown to either inhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter the interaction of IGFs with their cell surface receptors. Also exhibits IGF-independent antiproliferative and apoptotic effects mediated by its receptor TMEM219/IGFBP-3R. Inhibits the positive effect of humanin on insulin sensitivity . Promotes testicular germ cell apoptosis . . |
Accessions | ENST00000381086.9 ENST00000428530.5 ENST00000613132.5 [P17936-1] ENST00000613132 A6XND0 ENST00000448817.1 B3KWK7 ENST00000381083.9 [P17936-2] ENST00000417621.5 H0Y485 H0Y5K2 C9JMX4 P17936 |