IFNE | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of IFNE at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	83%	24.02	544 / 653	53%	2.66	320 / 605
bladder	67%	69.90	14 / 21	38%	2.23	192 / 504
ureter	0%	0	0 / 0	100%	1.80	1 / 1
esophagus	36%	33.46	527 / 1445	56%	2.34	102 / 183
stomach	72%	31.41	258 / 359	11%	0.25	31 / 286
prostate	78%	43.55	190 / 245	1%	0.02	6 / 502
kidney	54%	18.55	48 / 89	23%	0.88	211 / 901
uterus	15%	6.52	26 / 170	61%	3.38	279 / 459
pancreas	3%	0.39	9 / 328	53%	3.56	95 / 178
skin	34%	44.01	619 / 1809	4%	0.13	19 / 472
brain	32%	13.90	849 / 2642	1%	0.02	8 / 705
lung	10%	1.62	55 / 578	21%	0.75	242 / 1155
intestine	17%	6.93	169 / 966	11%	0.44	59 / 527
tonsil	0%	0	0 / 0	27%	1.38	12 / 45
breast	21%	4.73	95 / 459	3%	0.06	33 / 1118
ovary	3%	0.57	6 / 180	9%	0.19	40 / 430
adipose	10%	1.92	122 / 1204	0%	0	0 / 0
heart	3%	0.56	22 / 861	0%	0	0 / 0
adrenal gland	1%	0.13	2 / 258	2%	0.14	4 / 230
blood vessel	2%	0.23	21 / 1335	0%	0	0 / 0
liver	0%	0	0 / 226	1%	0.06	5 / 406
peripheral blood	1%	0.12	9 / 929	0%	0	0 / 0
spleen	1%	0.11	2 / 241	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0043330	Biological process	response to exogenous dsRNA
GO_0002250	Biological process	adaptive immune response
GO_0019221	Biological process	cytokine-mediated signaling pathway
GO_0098586	Biological process	cellular response to virus
GO_0042100	Biological process	B cell proliferation
GO_0060337	Biological process	type I interferon-mediated signaling pathway
GO_0051607	Biological process	defense response to virus
GO_0033141	Biological process	positive regulation of peptidyl-serine phosphorylation of STAT protein
GO_0002323	Biological process	natural killer cell activation involved in immune response
GO_0030183	Biological process	B cell differentiation
GO_0002286	Biological process	T cell activation involved in immune response
GO_0042742	Biological process	defense response to bacterium
GO_0006959	Biological process	humoral immune response
GO_0005615	Cellular component	extracellular space
GO_0005132	Molecular function	type I interferon receptor binding
GO_0005125	Molecular function	cytokine activity

Gene name	IFNE
Protein name	Interferon epsilon (IFN-epsilon) (Interferon epsilon-1)
Synonyms	IFNE1 UNQ360/PRO655
Description	FUNCTION: Type I interferon required for maintaining basal levels of IFN-regulated genes, including 2'-5'-oligoadenylate synthetase, IRF7 and ISG15, in the female reproductive tract. Directly mediates protection against viral and bacterial genital infections (By similarity). .
Accessions	ENST00000448696.4 Q86WN2

IFNE report