Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 13 studies | 32% ± 15% | |
type I pneumocyte | 10 studies | 26% ± 8% | |
basal cell | 7 studies | 32% ± 15% | |
ciliated cell | 7 studies | 35% ± 12% | |
secretory cell | 5 studies | 28% ± 15% | |
type II pneumocyte | 5 studies | 28% ± 14% | |
club cell | 4 studies | 27% ± 9% | |
brush cell | 4 studies | 27% ± 13% | |
goblet cell | 4 studies | 21% ± 5% | |
squamous epithelial cell | 3 studies | 43% ± 24% | |
enterocyte | 3 studies | 18% ± 2% | |
retinal cone cell | 3 studies | 30% ± 12% | |
intestinal crypt stem cell | 3 studies | 20% ± 1% | |
hepatocyte | 3 studies | 32% ± 23% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 33% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1010.28 | 245 / 245 | 100% | 24.89 | 502 / 502 |
thymus | 100% | 1012.76 | 653 / 653 | 100% | 30.74 | 604 / 605 |
ovary | 100% | 534.64 | 180 / 180 | 100% | 32.04 | 428 / 430 |
esophagus | 99% | 625.02 | 1437 / 1445 | 100% | 18.73 | 183 / 183 |
pancreas | 100% | 584.68 | 328 / 328 | 99% | 21.20 | 177 / 178 |
uterus | 100% | 581.47 | 170 / 170 | 99% | 31.80 | 455 / 459 |
breast | 100% | 776.29 | 459 / 459 | 99% | 27.79 | 1108 / 1118 |
intestine | 100% | 923.34 | 966 / 966 | 99% | 21.36 | 522 / 527 |
lung | 100% | 913.82 | 577 / 578 | 99% | 25.39 | 1142 / 1155 |
liver | 100% | 1278.86 | 226 / 226 | 99% | 23.07 | 400 / 406 |
kidney | 100% | 1297.03 | 89 / 89 | 98% | 23.88 | 887 / 901 |
stomach | 100% | 636.58 | 358 / 359 | 99% | 19.99 | 282 / 286 |
brain | 100% | 683.01 | 2631 / 2642 | 96% | 10.58 | 678 / 705 |
bladder | 95% | 435.38 | 20 / 21 | 99% | 25.48 | 497 / 504 |
skin | 100% | 979.06 | 1809 / 1809 | 93% | 21.75 | 438 / 472 |
adrenal gland | 100% | 1148.15 | 258 / 258 | 66% | 9.85 | 152 / 230 |
eye | 0% | 0 | 0 / 0 | 100% | 56.15 | 80 / 80 |
spleen | 100% | 657.86 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.80 | 1 / 1 |
adipose | 100% | 558.36 | 1202 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 23.02 | 44 / 45 |
heart | 94% | 293.62 | 807 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 11.94 | 27 / 29 |
muscle | 89% | 277.73 | 716 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 63% | 165.74 | 838 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 60% | 170.14 | 558 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0070370 | Biological process | cellular heat acclimation |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | HSBP1L1 |
Protein name | Heat shock factor binding protein 1 like 1 Heat shock factor-binding protein 1-like protein 1 |
Synonyms | |
Description | |
Accessions | K7ENV5 C9JCN9 ENST00000589516.1 ENST00000451882.3 |