Insufficient scRNA-seq data for expression of HOXB13 at single-cell level.
Insufficient scRNA-seq data for expression of HOXB13 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 11830.07 | 244 / 245 | 100% | 731.08 | 502 / 502 |
intestine | 60% | 369.93 | 576 / 966 | 73% | 34.61 | 387 / 527 |
bladder | 81% | 241.05 | 17 / 21 | 40% | 10.44 | 203 / 504 |
skin | 55% | 76.87 | 990 / 1809 | 46% | 13.08 | 218 / 472 |
stomach | 0% | 0.07 | 1 / 359 | 66% | 20.75 | 189 / 286 |
adipose | 43% | 32.60 | 520 / 1204 | 0% | 0 | 0 / 0 |
uterus | 3% | 9.74 | 5 / 170 | 38% | 13.38 | 173 / 459 |
esophagus | 6% | 2.68 | 81 / 1445 | 35% | 7.08 | 64 / 183 |
tonsil | 0% | 0 | 0 / 0 | 36% | 7.36 | 16 / 45 |
breast | 4% | 18.22 | 18 / 459 | 27% | 6.12 | 300 / 1118 |
lung | 0% | 0.17 | 2 / 578 | 27% | 5.96 | 307 / 1155 |
pancreas | 1% | 0.24 | 2 / 328 | 14% | 5.64 | 25 / 178 |
kidney | 3% | 0.84 | 3 / 89 | 8% | 2.13 | 68 / 901 |
adrenal gland | 0% | 0 | 0 / 258 | 9% | 1.43 | 20 / 230 |
ovary | 1% | 0.26 | 1 / 180 | 7% | 1.11 | 29 / 430 |
brain | 0% | 0.15 | 10 / 2642 | 6% | 1.47 | 42 / 705 |
liver | 0% | 0.09 | 1 / 226 | 6% | 0.98 | 23 / 406 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.46 | 1 / 29 |
thymus | 1% | 0.78 | 6 / 653 | 1% | 0.38 | 5 / 605 |
eye | 0% | 0 | 0 / 0 | 1% | 0.19 | 1 / 80 |
blood vessel | 1% | 2.94 | 15 / 1335 | 0% | 0 | 0 / 0 |
muscle | 1% | 0.52 | 6 / 803 | 0% | 0 | 0 / 0 |
heart | 1% | 0.22 | 5 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.11 | 4 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0033574 | Biological process | response to testosterone |
GO_0001525 | Biological process | angiogenesis |
GO_0008544 | Biological process | epidermis development |
GO_0060527 | Biological process | prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0060743 | Biological process | epithelial cell maturation involved in prostate gland development |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0009611 | Biological process | response to wounding |
GO_0040008 | Biological process | regulation of growth |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0008327 | Molecular function | methyl-CpG binding |
GO_0005515 | Molecular function | protein binding |
Gene name | HOXB13 |
Protein name | PSGD protein Homeobox protein Hox-B13 variant Homeobox protein Hox-B13 |
Synonyms | |
Description | FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Binds preferentially to methylated DNA . . |
Accessions | V5QRV9 Q92826 Q4KR72 ENST00000290295.8 |