Name | Number of supported studies | Average coverage | |
---|---|---|---|
squamous epithelial cell | 3 studies | 29% ± 10% |
Insufficient scRNA-seq data for expression of GRHL3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 48% | 1009.29 | 10 / 21 | 73% | 62.57 | 370 / 504 |
esophagus | 39% | 5247.35 | 564 / 1445 | 73% | 34.17 | 134 / 183 |
ureter | 0% | 0 | 0 / 0 | 100% | 73.04 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 61.16 | 44 / 45 |
skin | 72% | 4629.56 | 1297 / 1809 | 9% | 1.42 | 44 / 472 |
uterus | 1% | 108.69 | 2 / 170 | 74% | 38.57 | 339 / 459 |
brain | 2% | 18.24 | 64 / 2642 | 66% | 7.17 | 463 / 705 |
ovary | 0% | 0 | 0 / 180 | 65% | 5.66 | 279 / 430 |
thymus | 0% | 0 | 0 / 653 | 56% | 4.82 | 340 / 605 |
lung | 0% | 0 | 0 / 578 | 54% | 13.24 | 627 / 1155 |
intestine | 0% | 0 | 0 / 966 | 50% | 5.44 | 262 / 527 |
breast | 0% | 0 | 0 / 459 | 46% | 3.70 | 514 / 1118 |
prostate | 14% | 91.87 | 34 / 245 | 27% | 1.58 | 138 / 502 |
stomach | 1% | 12.63 | 3 / 359 | 38% | 3.17 | 110 / 286 |
pancreas | 0% | 1.43 | 1 / 328 | 14% | 6.15 | 25 / 178 |
kidney | 0% | 0 | 0 / 89 | 8% | 0.98 | 76 / 901 |
liver | 0% | 0 | 0 / 226 | 1% | 0.08 | 6 / 406 |
adipose | 1% | 8.99 | 7 / 1204 | 0% | 0 | 0 / 0 |
muscle | 0% | 1.95 | 2 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 1.82 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0008544 | Biological process | epidermis development |
GO_0061436 | Biological process | establishment of skin barrier |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0090103 | Biological process | cochlea morphogenesis |
GO_0090179 | Biological process | planar cell polarity pathway involved in neural tube closure |
GO_0042060 | Biological process | wound healing |
GO_0001843 | Biological process | neural tube closure |
GO_0007417 | Biological process | central nervous system development |
GO_0061029 | Biological process | eyelid development in camera-type eye |
GO_0032956 | Biological process | regulation of actin cytoskeleton organization |
GO_0007398 | Biological process | ectoderm development |
GO_0001736 | Biological process | establishment of planar polarity |
GO_0007389 | Biological process | pattern specification process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_0031490 | Molecular function | chromatin DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | GRHL3 |
Protein name | Grainyhead like transcription factor 3 Grainyhead-like protein 3 homolog (Sister of mammalian grainyhead) (Transcription factor CP2-like 4) Grainyhead-like protein 3 homolog |
Synonyms | SOM TFCP2L4 |
Description | FUNCTION: Transcription factor playing important roles in primary neurulation and in the differentiation of stratified epithelia of both ectodermal and endodermal origin (By similarity). Binds directly to the consensus DNA sequence 5'-AACCGGTT-3' acting as an activator and repressor on distinct target genes . xhibits functional redundancy with GRHL2 in epidermal morphogenetic events and epidermal wound repair (By similarity). Exhibits functional redundancy with GRHL2 in epidermal morphogenetic events and epidermal wound repair but is essential to form the epidermal barrier with TGM3 as critical direct target gene among others. Despite being dispensable during normal epidermal homeostasis in the adulthood, is again required for barrier repair after immune-mediated epidermal damage, regulates distinct gene batteries in embryonic epidermal differentiation and adult epidermal barrier reformation after injury. Plays unique and cooperative roles with GRHL2 in establishing distinct zones of primary neurulation. Essential for spinal closure, functions cooperatively with GRHL2 in closure 2 (forebrain/midbrain boundary) and posterior neuropore closure (By similarity). Also required for proper development of the oral periderm . No genetic interaction with GRHL3, no functional cooperativity due to diverse target gene selectivity . . |
Accessions | ENST00000692334.1 [Q8TE85-4] ENST00000528064 Q8TE85 ENST00000528064.6 [Q8TE85-4] ENST00000461318.2 ENST00000350501.9 [Q8TE85-1] ENST00000689444.1 [Q8TE85-3] E9PLG9 E9PLT6 ENST00000690803.1 [Q8TE85-4] ENST00000524724 ENST00000524724.6 [Q8TE85-3] A0A8I5KUQ1 ENST00000356046.6 [Q8TE85-3] ENST00000361548.9 [Q8TE85-5] ENST00000236255.4 [Q8TE85-2] |