Insufficient scRNA-seq data for expression of FOXD3 at single-cell level.
Insufficient scRNA-seq data for expression of FOXD3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 49% | 25.37 | 881 / 1809 | 97% | 22.08 | 456 / 472 |
prostate | 86% | 119.47 | 210 / 245 | 39% | 1.32 | 198 / 502 |
esophagus | 76% | 168.96 | 1099 / 1445 | 30% | 0.92 | 55 / 183 |
intestine | 87% | 251.77 | 841 / 966 | 5% | 0.09 | 24 / 527 |
bladder | 81% | 110.95 | 17 / 21 | 5% | 0.13 | 26 / 504 |
eye | 0% | 0 | 0 / 0 | 84% | 2.35 | 67 / 80 |
uterus | 29% | 26.02 | 49 / 170 | 40% | 1.39 | 182 / 459 |
tonsil | 0% | 0 | 0 / 0 | 64% | 2.34 | 29 / 45 |
stomach | 49% | 73.10 | 175 / 359 | 9% | 0.27 | 27 / 286 |
heart | 54% | 51.38 | 467 / 861 | 0% | 0 | 0 / 0 |
breast | 27% | 19.74 | 124 / 459 | 21% | 0.53 | 231 / 1118 |
adrenal gland | 17% | 11.83 | 45 / 258 | 27% | 0.86 | 61 / 230 |
ovary | 26% | 17.58 | 46 / 180 | 18% | 0.82 | 79 / 430 |
brain | 1% | 1.07 | 24 / 2642 | 32% | 1.36 | 228 / 705 |
blood vessel | 29% | 29.20 | 385 / 1335 | 0% | 0 | 0 / 0 |
adipose | 25% | 20.84 | 296 / 1204 | 0% | 0 | 0 / 0 |
thymus | 20% | 10.02 | 130 / 653 | 3% | 0.14 | 16 / 605 |
lung | 1% | 0.65 | 6 / 578 | 17% | 0.40 | 201 / 1155 |
muscle | 17% | 7.32 | 134 / 803 | 0% | 0 | 0 / 0 |
pancreas | 4% | 1.81 | 13 / 328 | 12% | 0.35 | 21 / 178 |
kidney | 12% | 6.16 | 11 / 89 | 0% | 0.01 | 2 / 901 |
liver | 2% | 1.11 | 5 / 226 | 1% | 0.04 | 5 / 406 |
spleen | 2% | 0.59 | 4 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.04 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030154 | Biological process | cell differentiation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0001701 | Biological process | in utero embryonic development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0009653 | Biological process | anatomical structure morphogenesis |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
Gene name | FOXD3 |
Protein name | Forkhead box protein D3 (HNF3/FH transcription factor genesis) |
Synonyms | HFH2 |
Description | FUNCTION: Binds to the consensus sequence 5'-A[AT]T[AG]TTTGTTT-3' and acts as a transcriptional repressor . Also acts as a transcriptional activator . Negatively regulates transcription of transcriptional repressor RHIT/ZNF205 . Promotes development of neural crest cells from neural tube progenitors . Restricts neural progenitor cells to the neural crest lineage while suppressing interneuron differentiation . Required for maintenance of pluripotent cells in the pre-implantation and peri-implantation stages of embryogenesis . . |
Accessions | Q9UJU5 ENST00000371116.4 |