Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 30 studies | 29% ± 11% | |
capillary endothelial cell | 9 studies | 22% ± 8% | |
endothelial cell of artery | 7 studies | 22% ± 5% | |
vein endothelial cell | 6 studies | 33% ± 20% | |
endothelial cell of lymphatic vessel | 6 studies | 39% ± 12% | |
endothelial cell of vascular tree | 4 studies | 37% ± 19% | |
GABAergic neuron | 3 studies | 19% ± 2% |
Insufficient scRNA-seq data for expression of FGD5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 4683.63 | 459 / 459 | 98% | 13.50 | 1096 / 1118 |
thymus | 100% | 2534.49 | 652 / 653 | 95% | 10.33 | 573 / 605 |
lung | 100% | 4990.20 | 578 / 578 | 91% | 7.18 | 1050 / 1155 |
kidney | 100% | 2530.89 | 89 / 89 | 90% | 21.99 | 812 / 901 |
stomach | 96% | 1135.58 | 343 / 359 | 92% | 8.36 | 263 / 286 |
prostate | 100% | 1669.75 | 244 / 245 | 87% | 5.16 | 439 / 502 |
intestine | 100% | 1640.22 | 962 / 966 | 86% | 6.69 | 454 / 527 |
esophagus | 94% | 1544.79 | 1364 / 1445 | 89% | 8.26 | 163 / 183 |
bladder | 100% | 1849.00 | 21 / 21 | 81% | 6.97 | 409 / 504 |
adrenal gland | 95% | 982.79 | 245 / 258 | 84% | 11.87 | 194 / 230 |
ovary | 97% | 1433.73 | 174 / 180 | 82% | 7.97 | 353 / 430 |
uterus | 99% | 3054.82 | 169 / 170 | 64% | 4.16 | 295 / 459 |
skin | 70% | 1072.94 | 1273 / 1809 | 70% | 4.16 | 332 / 472 |
pancreas | 31% | 195.22 | 102 / 328 | 98% | 17.15 | 175 / 178 |
brain | 34% | 220.85 | 910 / 2642 | 86% | 4.02 | 604 / 705 |
adipose | 100% | 5180.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 5093.92 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.95 | 1 / 1 |
heart | 99% | 1599.20 | 855 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 96% | 1668.42 | 1275 / 1335 | 0% | 0 | 0 / 0 |
liver | 18% | 126.63 | 40 / 226 | 72% | 3.50 | 291 / 406 |
lymph node | 0% | 0 | 0 / 0 | 79% | 3.63 | 23 / 29 |
tonsil | 0% | 0 | 0 / 0 | 76% | 5.09 | 34 / 45 |
eye | 0% | 0 | 0 / 0 | 68% | 4.78 | 54 / 80 |
muscle | 62% | 459.00 | 495 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 2.37 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0007010 | Biological process | cytoskeleton organization |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0043087 | Biological process | regulation of GTPase activity |
GO_0046847 | Biological process | filopodium assembly |
GO_0008360 | Biological process | regulation of cell shape |
GO_0001726 | Cellular component | ruffle |
GO_0032587 | Cellular component | ruffle membrane |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005886 | Cellular component | plasma membrane |
GO_0005769 | Cellular component | early endosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0030027 | Cellular component | lamellipodium |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0031267 | Molecular function | small GTPase binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | FGD5 |
Protein name | FGD5 protein (FYVE, RhoGEF and PH domain containing 5) FGD5 Alternative protein FGD5 FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23) FYVE, RhoGEF and PH domain containing 5 |
Synonyms | ZFYVE23 |
Description | FUNCTION: Activates CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. Mediates VEGF-induced CDC42 activation. May regulate proangiogenic action of VEGF in vascular endothelial cells, including network formation, directional movement and proliferation. May play a role in regulating the actin cytoskeleton and cell shape. . |
Accessions | H7C0G2 B7ZM68 Q6ZNL6 ENST00000285046.10 [Q6ZNL6-1] A0A1W2PRG7 ENST00000457774.1 A0A2X0SFF2 ENST00000543601.5 L0R6G7 ENST00000640506.1 A3KMQ0 |