Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 21 studies | 33% ± 13% | |
astrocyte | 9 studies | 38% ± 18% | |
macrophage | 9 studies | 32% ± 13% | |
fibroblast | 9 studies | 27% ± 11% | |
microglial cell | 8 studies | 31% ± 13% | |
oligodendrocyte precursor cell | 8 studies | 43% ± 18% | |
adipocyte | 8 studies | 29% ± 9% | |
oligodendrocyte | 8 studies | 41% ± 14% | |
GABAergic neuron | 7 studies | 40% ± 21% | |
glutamatergic neuron | 7 studies | 43% ± 20% | |
ciliated cell | 7 studies | 28% ± 13% | |
epithelial cell | 6 studies | 31% ± 15% | |
pericyte | 6 studies | 25% ± 10% | |
neuron | 5 studies | 45% ± 17% | |
interneuron | 5 studies | 54% ± 23% | |
endothelial cell of lymphatic vessel | 5 studies | 29% ± 7% | |
smooth muscle cell | 5 studies | 23% ± 3% | |
granule cell | 4 studies | 24% ± 5% | |
cardiac muscle cell | 4 studies | 22% ± 1% | |
mast cell | 4 studies | 22% ± 6% | |
amacrine cell | 4 studies | 18% ± 4% | |
myeloid cell | 4 studies | 25% ± 5% | |
club cell | 4 studies | 23% ± 7% | |
monocyte | 4 studies | 26% ± 5% | |
type I pneumocyte | 4 studies | 23% ± 6% | |
type II pneumocyte | 4 studies | 21% ± 6% | |
basal cell | 4 studies | 32% ± 18% | |
Mueller cell | 3 studies | 19% ± 6% | |
retinal cone cell | 3 studies | 33% ± 15% | |
retinal rod cell | 3 studies | 21% ± 1% | |
endothelial cell of vascular tree | 3 studies | 34% ± 19% | |
hepatocyte | 3 studies | 39% ± 20% | |
abnormal cell | 3 studies | 33% ± 12% | |
T cell | 3 studies | 21% ± 2% | |
alveolar macrophage | 3 studies | 26% ± 8% | |
capillary endothelial cell | 3 studies | 19% ± 4% | |
respiratory goblet cell | 3 studies | 31% ± 12% | |
lymphocyte | 3 studies | 32% ± 7% | |
goblet cell | 3 studies | 40% ± 28% | |
mesothelial cell | 3 studies | 29% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2442.51 | 1445 / 1445 | 100% | 21.03 | 183 / 183 |
prostate | 100% | 3061.41 | 245 / 245 | 100% | 31.17 | 502 / 502 |
stomach | 100% | 2047.59 | 359 / 359 | 100% | 18.43 | 286 / 286 |
brain | 100% | 2373.96 | 2641 / 2642 | 100% | 35.84 | 705 / 705 |
breast | 100% | 3248.21 | 459 / 459 | 100% | 31.54 | 1117 / 1118 |
lung | 100% | 2387.51 | 577 / 578 | 100% | 20.64 | 1155 / 1155 |
intestine | 100% | 2748.39 | 966 / 966 | 100% | 17.97 | 526 / 527 |
adrenal gland | 100% | 2786.19 | 258 / 258 | 100% | 25.96 | 229 / 230 |
thymus | 100% | 2706.32 | 653 / 653 | 100% | 24.94 | 602 / 605 |
bladder | 100% | 2708.43 | 21 / 21 | 99% | 17.20 | 501 / 504 |
uterus | 100% | 3053.74 | 170 / 170 | 99% | 18.44 | 456 / 459 |
ovary | 100% | 2748.59 | 180 / 180 | 99% | 16.07 | 426 / 430 |
pancreas | 99% | 1333.18 | 326 / 328 | 99% | 18.09 | 177 / 178 |
kidney | 100% | 1853.06 | 89 / 89 | 99% | 18.96 | 890 / 901 |
skin | 100% | 3026.50 | 1809 / 1809 | 99% | 21.33 | 466 / 472 |
liver | 100% | 1121.69 | 226 / 226 | 92% | 9.45 | 374 / 406 |
adipose | 100% | 2848.16 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2673.63 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.82 | 29 / 29 |
muscle | 100% | 2020.78 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2613.67 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.21 | 45 / 45 |
heart | 98% | 1635.63 | 845 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 14.98 | 78 / 80 |
peripheral blood | 92% | 1598.76 | 857 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0035357 | Biological process | peroxisome proliferator activated receptor signaling pathway |
GO_0045444 | Biological process | fat cell differentiation |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM120B |
Protein name | Constitutive coactivator of peroxisome proliferator-activated receptor gamma (Family with sequence similarity 120B) Constitutive coactivator of peroxisome proliferator-activated receptor gamma (Constitutive coactivator of PPAR-gamma) (Constitutive coactivator of PPARG) (PPARG constitutive coactivator 1) (PGCC1) (Protein FAM120B) |
Synonyms | KIAA1838 CCPG |
Description | FUNCTION: Functions as a transactivator of PPARG and ESR1. Functions in adipogenesis through PPARG activation (By similarity). . |
Accessions | ENST00000625626.1 [Q96EK7-3] ENST00000622189.4 ENST00000619268.4 ENST00000617082.4 [Q96EK7-1] ENST00000616072.2 [Q96EK7-3] Q96EK7 F5GY05 A0A0D9SEJ5 ENST00000537664.5 ENST00000476287.4 [Q96EK7-1] ENST00000630384.2 |