EMX1 | OmnibusX

Name	Number of supported studies	Average coverage
kidney distal convoluted tubule epithelial cell	5 studies	44% ± 17%	Explore
renal principal cell	4 studies	37% ± 18%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of EMX1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	100%	2318.63	89 / 89	93%	9.04	835 / 901
brain	39%	255.91	1033 / 2642	32%	1.55	223 / 705
stomach	38%	12.41	136 / 359	27%	1.25	77 / 286
intestine	29%	16.90	281 / 966	22%	0.80	116 / 527
esophagus	4%	1.09	58 / 1445	41%	1.53	75 / 183
breast	2%	0.59	10 / 459	31%	1.42	346 / 1118
liver	9%	2.72	21 / 226	23%	0.76	94 / 406
pancreas	23%	6.11	75 / 328	9%	0.40	16 / 178
tonsil	0%	0	0 / 0	24%	0.83	11 / 45
lung	0%	0.13	2 / 578	20%	0.75	233 / 1155
peripheral blood	19%	60.38	174 / 929	0%	0	0 / 0
bladder	0%	0	0 / 21	16%	0.49	79 / 504
adipose	16%	6.55	188 / 1204	0%	0	0 / 0
uterus	0%	0	0 / 170	14%	0.53	62 / 459
ovary	7%	2.01	12 / 180	6%	0.37	27 / 430
adrenal gland	0%	0	0 / 258	10%	0.45	22 / 230
skin	7%	1.58	126 / 1809	2%	0.06	9 / 472
thymus	8%	3.39	49 / 653	1%	0.05	8 / 605
muscle	2%	0.55	20 / 803	0%	0	0 / 0
prostate	1%	0.24	3 / 245	0%	0	0 / 502
spleen	1%	0.16	2 / 241	0%	0	0 / 0
blood vessel	0%	0.06	2 / 1335	0%	0	0 / 0
heart	0%	0.03	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0009791	Biological process	post-embryonic development
GO_0001701	Biological process	in utero embryonic development
GO_0060019	Biological process	radial glial cell differentiation
GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0048872	Biological process	homeostasis of number of cells
GO_0030182	Biological process	neuron differentiation
GO_0060563	Biological process	neuroepithelial cell differentiation
GO_0021796	Biological process	cerebral cortex regionalization
GO_0007417	Biological process	central nervous system development
GO_0007420	Biological process	brain development
GO_0048854	Biological process	brain morphogenesis
GO_0070445	Biological process	regulation of oligodendrocyte progenitor proliferation
GO_1990138	Biological process	neuron projection extension
GO_0009410	Biological process	response to xenobiotic stimulus
GO_0021895	Biological process	cerebral cortex neuron differentiation
GO_0005730	Cellular component	nucleolus
GO_0005737	Cellular component	cytoplasm
GO_0005694	Cellular component	chromosome
GO_0000785	Cellular component	chromatin
GO_0005634	Cellular component	nucleus
GO_0000978	Molecular function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO_0000981	Molecular function	DNA-binding transcription factor activity, RNA polymerase II-specific
GO_1990837	Molecular function	sequence-specific double-stranded DNA binding
GO_0005515	Molecular function	protein binding

Gene name	EMX1
Protein name	Empty spiracles homeobox 1 (Empty spiracles homolog 1 (Drosophila), isoform CRA_a) Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles-like protein 1) Empty spiracles homeobox 1
Synonyms	hCG_40556
Description	FUNCTION: Transcription factor, which in cooperation with EMX2, acts to generate the boundary between the roof and archipallium in the developing brain. May function in combinations with OTX1/2 to specify cell fates in the developing central nervous system.
Accessions	Q04741 ENST00000473732.1 F8W1B5 ENST00000394111.6 A0A087WZF2 ENST00000258106.11 [Q04741-1]

EMX1 report