EMP1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	44 studies	47% ± 20%	Explore
fibroblast	37 studies	44% ± 20%	Explore
endothelial cell of lymphatic vessel	23 studies	53% ± 17%	Explore
pericyte	17 studies	36% ± 12%	Explore
basal cell	16 studies	33% ± 19%	Explore
endothelial cell of artery	15 studies	57% ± 18%	Explore
macrophage	14 studies	25% ± 7%	Explore
endothelial cell of vascular tree	14 studies	64% ± 23%	Explore
capillary endothelial cell	13 studies	42% ± 15%	Explore
vein endothelial cell	13 studies	48% ± 17%	Explore
epithelial cell	11 studies	47% ± 19%	Explore
smooth muscle cell	11 studies	29% ± 14%	Explore
connective tissue cell	9 studies	45% ± 18%	Explore
adipocyte	9 studies	51% ± 10%	Explore
secretory cell	8 studies	41% ± 20%	Explore
astrocyte	6 studies	35% ± 17%	Explore
myeloid cell	6 studies	26% ± 8%	Explore
myofibroblast cell	6 studies	33% ± 10%	Explore
type I pneumocyte	5 studies	27% ± 6%	Explore
adventitial cell	5 studies	50% ± 19%	Explore
mesothelial cell	5 studies	24% ± 7%	Explore
conventional dendritic cell	5 studies	22% ± 2%	Explore
melanocyte	5 studies	57% ± 21%	Explore
keratinocyte	5 studies	45% ± 21%	Explore
squamous epithelial cell	4 studies	75% ± 16%	Explore
kidney loop of Henle epithelial cell	4 studies	28% ± 7%	Explore
dendritic cell	4 studies	27% ± 4%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	53% ± 8%	Explore
abnormal cell	3 studies	33% ± 14%	Explore
luminal cell of prostate epithelium	3 studies	46% ± 4%	Explore
ependymal cell	3 studies	30% ± 16%	Explore
progenitor cell of mammary luminal epithelium	3 studies	38% ± 15%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	8 studies	22% ± 6%	Explore
uterus	5 studies	33% ± 9%	Explore
esophagus	5 studies	38% ± 17%	Explore
breast	5 studies	34% ± 19%	Explore
adipose	4 studies	28% ± 8%	Explore
prostate	4 studies	39% ± 5%	Explore
skin	4 studies	40% ± 18%	Explore
heart	3 studies	18% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	31695.11	458 / 459	96%	84.22	1074 / 1118
skin	100%	33776.13	1808 / 1809	93%	182.98	441 / 472
lung	99%	28275.77	575 / 578	93%	78.40	1069 / 1155
esophagus	93%	108298.69	1350 / 1445	92%	145.11	169 / 183
thymus	100%	23617.07	650 / 653	86%	95.19	518 / 605
uterus	92%	12471.02	156 / 170	86%	92.83	397 / 459
intestine	77%	8770.79	743 / 966	85%	59.00	446 / 527
bladder	76%	7538.76	16 / 21	79%	54.06	400 / 504
prostate	61%	5193.59	150 / 245	75%	36.41	374 / 502
stomach	48%	5947.21	172 / 359	83%	45.17	238 / 286
kidney	37%	3584.12	33 / 89	70%	48.24	629 / 901
ovary	20%	2270.35	36 / 180	81%	43.73	347 / 430
adipose	100%	47207.16	1204 / 1204	0%	0	0 / 0
pancreas	5%	306.46	15 / 328	93%	110.06	166 / 178
eye	0%	0	0 / 0	96%	111.68	77 / 80
tonsil	0%	0	0 / 0	91%	112.17	41 / 45
brain	9%	935.28	240 / 2642	79%	78.73	560 / 705
blood vessel	88%	12009.47	1171 / 1335	0%	0	0 / 0
heart	79%	11163.66	679 / 861	0%	0	0 / 0
adrenal gland	26%	1789.85	67 / 258	38%	20.85	87 / 230
spleen	35%	2365.31	85 / 241	0%	0	0 / 0
liver	2%	106.16	4 / 226	17%	6.21	67 / 406
muscle	16%	1138.64	126 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	14%	3.92	4 / 29
peripheral blood	0%	24.53	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1