Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 45% ± 15% | |
glutamatergic neuron | 13 studies | 53% ± 27% | |
oligodendrocyte precursor cell | 12 studies | 40% ± 15% | |
microglial cell | 12 studies | 41% ± 13% | |
GABAergic neuron | 11 studies | 55% ± 27% | |
astrocyte | 11 studies | 33% ± 15% | |
endothelial cell | 10 studies | 32% ± 16% | |
macrophage | 9 studies | 35% ± 15% | |
neuron | 6 studies | 50% ± 23% | |
interneuron | 6 studies | 63% ± 21% | |
basal cell | 6 studies | 42% ± 18% | |
T cell | 5 studies | 20% ± 4% | |
myeloid cell | 5 studies | 27% ± 9% | |
club cell | 5 studies | 39% ± 16% | |
type I pneumocyte | 5 studies | 23% ± 9% | |
type II pneumocyte | 5 studies | 36% ± 7% | |
epithelial cell | 4 studies | 27% ± 12% | |
granule cell | 4 studies | 47% ± 19% | |
Mueller cell | 4 studies | 33% ± 6% | |
amacrine cell | 4 studies | 40% ± 7% | |
retina horizontal cell | 4 studies | 38% ± 4% | |
retinal rod cell | 4 studies | 22% ± 3% | |
GABAergic interneuron | 3 studies | 61% ± 2% | |
plasma cell | 3 studies | 27% ± 9% | |
GABAergic amacrine cell | 3 studies | 40% ± 6% | |
glycinergic amacrine cell | 3 studies | 34% ± 5% | |
retinal cone cell | 3 studies | 20% ± 5% | |
retinal ganglion cell | 3 studies | 32% ± 8% | |
hepatocyte | 3 studies | 36% ± 18% | |
alveolar macrophage | 3 studies | 27% ± 2% | |
respiratory goblet cell | 3 studies | 43% ± 22% | |
lymphocyte | 3 studies | 29% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2781.69 | 2642 / 2642 | 100% | 8.91 | 705 / 705 |
prostate | 100% | 1771.52 | 245 / 245 | 100% | 19.51 | 502 / 502 |
thymus | 100% | 1823.94 | 653 / 653 | 100% | 15.41 | 605 / 605 |
ovary | 100% | 757.96 | 180 / 180 | 100% | 9.86 | 429 / 430 |
breast | 98% | 1220.02 | 449 / 459 | 100% | 14.04 | 1117 / 1118 |
kidney | 100% | 826.02 | 89 / 89 | 97% | 5.58 | 874 / 901 |
pancreas | 99% | 583.56 | 326 / 328 | 97% | 5.90 | 173 / 178 |
uterus | 96% | 600.06 | 164 / 170 | 99% | 11.43 | 454 / 459 |
lung | 97% | 589.99 | 559 / 578 | 98% | 10.03 | 1130 / 1155 |
skin | 95% | 689.59 | 1721 / 1809 | 99% | 8.35 | 466 / 472 |
stomach | 92% | 682.42 | 329 / 359 | 92% | 5.36 | 263 / 286 |
bladder | 86% | 573.33 | 18 / 21 | 95% | 8.82 | 480 / 504 |
esophagus | 74% | 397.72 | 1075 / 1445 | 96% | 7.82 | 175 / 183 |
liver | 84% | 320.39 | 190 / 226 | 85% | 3.31 | 346 / 406 |
intestine | 62% | 226.57 | 598 / 966 | 91% | 4.78 | 480 / 527 |
adrenal gland | 74% | 275.02 | 192 / 258 | 77% | 4.41 | 178 / 230 |
eye | 0% | 0 | 0 / 0 | 100% | 9.89 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.35 | 29 / 29 |
spleen | 100% | 552.33 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 10.48 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.77 | 1 / 1 |
adipose | 95% | 464.40 | 1144 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 91% | 432.74 | 1216 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 71% | 307.45 | 663 / 929 | 0% | 0 | 0 / 0 |
heart | 43% | 136.60 | 370 / 861 | 0% | 0 | 0 / 0 |
muscle | 39% | 136.51 | 311 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0099536 | Biological process | synaptic signaling |
GO_0030182 | Biological process | neuron differentiation |
GO_0014069 | Cellular component | postsynaptic density |
GO_0009925 | Cellular component | basal plasma membrane |
GO_0060077 | Cellular component | inhibitory synapse |
GO_0030425 | Cellular component | dendrite |
GO_0045202 | Cellular component | synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | DTNB |
Protein name | Dystrobrevin Uncharacterized protein DTNB Dystrobrevin beta (DTN-B) (Beta-dystrobrevin) Dystrobrevin beta |
Synonyms | |
Description | FUNCTION: Scaffolding protein that assembles DMD and SNTA1 molecules to the basal membrane of kidney cells and liver sinusoids (By similarity). May function as a repressor of the SYN1 promoter through the binding of repressor element-1 (RE-1), in turn regulates SYN1 expression and may be involved in cell proliferation regulation during the early phase of neural differentiation . May be required for proper maturation and function of a subset of inhibitory synapses (By similarity). . |
Accessions | ENST00000404103.7 [O60941-4] Q53SF9 E9PE76 F8WD22 O60941 Q53T51 ENST00000288642.12 E7EVB6 E9PEY4 ENST00000398951.6 Q53TC8 ENST00000405222.5 [O60941-5] E7ES64 ENST00000407661.7 [O60941-7] ENST00000407038.7 [O60941-2] ENST00000406818.8 [O60941-1] Q53QV1 ENST00000349996.6 ENST00000356599.9 ENST00000303659.8 Q1I0L3 F8W9U0 ENST00000407186.5 |