Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 63% ± 16% | |
oligodendrocyte precursor cell | 14 studies | 64% ± 21% | |
glutamatergic neuron | 12 studies | 42% ± 19% | |
GABAergic neuron | 11 studies | 55% ± 26% | |
endothelial cell | 7 studies | 27% ± 15% | |
retinal rod cell | 7 studies | 57% ± 35% | |
interneuron | 6 studies | 77% ± 8% | |
astrocyte | 6 studies | 31% ± 15% | |
endothelial cell of lymphatic vessel | 6 studies | 26% ± 9% | |
neuron | 4 studies | 33% ± 14% | |
retinal bipolar neuron | 4 studies | 53% ± 33% | |
macrophage | 4 studies | 25% ± 5% | |
microglial cell | 4 studies | 33% ± 13% | |
pericyte | 4 studies | 22% ± 4% | |
amacrine cell | 4 studies | 51% ± 25% | |
retinal cone cell | 4 studies | 37% ± 24% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 64% ± 11% | |
GABAergic interneuron | 3 studies | 57% ± 10% | |
granule cell | 3 studies | 44% ± 16% | |
mesothelial cell | 3 studies | 24% ± 6% | |
GABAergic amacrine cell | 3 studies | 30% ± 9% | |
ON-bipolar cell | 3 studies | 71% ± 31% | |
glycinergic amacrine cell | 3 studies | 42% ± 20% | |
rod bipolar cell | 3 studies | 71% ± 28% | |
ciliated cell | 3 studies | 33% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1446.67 | 2642 / 2642 | 95% | 28.99 | 668 / 705 |
kidney | 100% | 800.18 | 89 / 89 | 93% | 7.82 | 835 / 901 |
ovary | 100% | 1504.58 | 180 / 180 | 55% | 2.86 | 238 / 430 |
thymus | 81% | 234.71 | 527 / 653 | 46% | 1.51 | 276 / 605 |
uterus | 94% | 885.05 | 160 / 170 | 14% | 0.45 | 64 / 459 |
pancreas | 46% | 118.73 | 152 / 328 | 48% | 1.78 | 85 / 178 |
intestine | 84% | 417.13 | 814 / 966 | 9% | 0.29 | 46 / 527 |
lung | 62% | 175.26 | 361 / 578 | 15% | 0.48 | 176 / 1155 |
bladder | 71% | 321.52 | 15 / 21 | 6% | 0.23 | 30 / 504 |
adrenal gland | 14% | 32.93 | 37 / 258 | 60% | 5.22 | 139 / 230 |
spleen | 74% | 269.49 | 179 / 241 | 0% | 0 | 0 / 0 |
prostate | 60% | 242.99 | 147 / 245 | 1% | 0.01 | 3 / 502 |
adipose | 57% | 247.40 | 689 / 1204 | 0% | 0 | 0 / 0 |
breast | 39% | 90.15 | 181 / 459 | 17% | 0.60 | 191 / 1118 |
esophagus | 47% | 136.01 | 679 / 1445 | 8% | 0.35 | 15 / 183 |
stomach | 41% | 133.02 | 148 / 359 | 12% | 0.41 | 34 / 286 |
heart | 50% | 119.33 | 429 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 28% | 0.78 | 8 / 29 |
liver | 8% | 14.64 | 17 / 226 | 15% | 0.61 | 62 / 406 |
peripheral blood | 12% | 47.08 | 109 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 9% | 19.28 | 126 / 1335 | 0% | 0 | 0 / 0 |
skin | 5% | 9.24 | 90 / 1809 | 3% | 0.17 | 13 / 472 |
eye | 0% | 0 | 0 / 0 | 5% | 0.58 | 4 / 80 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.20 | 2 / 45 |
muscle | 0% | 0.76 | 4 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007409 | Biological process | axonogenesis |
GO_0007420 | Biological process | brain development |
GO_0048704 | Biological process | embryonic skeletal system morphogenesis |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0001709 | Biological process | cell fate determination |
GO_0007411 | Biological process | axon guidance |
GO_0070593 | Biological process | dendrite self-avoidance |
GO_0009953 | Biological process | dorsal/ventral pattern formation |
GO_0007417 | Biological process | central nervous system development |
GO_0005615 | Cellular component | extracellular space |
GO_0009986 | Cellular component | cell surface |
GO_0030424 | Cellular component | axon |
GO_0045202 | Cellular component | synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0098632 | Molecular function | cell-cell adhesion mediator activity |
Gene name | DSCAML1 |
Protein name | DS cell adhesion molecule like 1 (Down syndrome cell adhesion molecule like 1, isoform CRA_b) Cell adhesion molecule DSCAML1 (Down syndrome cell adhesion molecule 2) (Down syndrome cell adhesion molecule-like protein 1) DS cell adhesion molecule like 1 |
Synonyms | hCG_1810968 KIAA1132 DSCAM2 |
Description | FUNCTION: Cell adhesion molecule that plays a role in neuronal self-avoidance . Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Promotes both isoneuronal self-avoidance for creating an orderly neurite arborization in retinal rod bipolar cells and heteroneuronal self-avoidance to maintain mosaic spacing between AII amacrine cells (By similarity). Adhesion molecule that promotes lamina-specific synaptic connections in the retina: expressed in specific subsets of interneurons and retinal ganglion cells (RGCs) and promotes synaptic connectivity via homophilic interactions (By similarity). . |
Accessions | ENST00000525836.1 A0A384DVL8 E9PP71 ENST00000651296.2 [Q8TD84-1] Q8TD84 ENST00000651172.1 ENST00000527706.5 [Q8TD84-2] ENST00000321322.6 |