Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 18 studies | 27% ± 16% | |
endothelial cell | 16 studies | 34% ± 11% | |
fibroblast | 16 studies | 29% ± 11% | |
smooth muscle cell | 15 studies | 27% ± 8% | |
endothelial cell of vascular tree | 10 studies | 24% ± 6% | |
mast cell | 8 studies | 20% ± 4% | |
natural killer cell | 8 studies | 27% ± 13% | |
myofibroblast cell | 8 studies | 27% ± 16% | |
macrophage | 7 studies | 24% ± 8% | |
endothelial cell of lymphatic vessel | 7 studies | 30% ± 11% | |
B cell | 6 studies | 21% ± 7% | |
connective tissue cell | 6 studies | 24% ± 4% | |
endothelial cell of artery | 6 studies | 20% ± 4% | |
CD4-positive, alpha-beta T cell | 5 studies | 28% ± 8% | |
regulatory T cell | 5 studies | 26% ± 7% | |
capillary endothelial cell | 4 studies | 19% ± 1% | |
conventional dendritic cell | 4 studies | 24% ± 6% | |
epithelial cell | 4 studies | 28% ± 15% | |
ciliated cell | 4 studies | 25% ± 8% | |
CD8-positive, alpha-beta T cell | 4 studies | 25% ± 8% | |
astrocyte | 4 studies | 21% ± 2% | |
gamma-delta T cell | 4 studies | 25% ± 12% | |
glomerular endothelial cell | 3 studies | 35% ± 13% | |
retinal ganglion cell | 3 studies | 39% ± 14% | |
abnormal cell | 3 studies | 19% ± 2% | |
retinal cone cell | 3 studies | 40% ± 3% | |
Mueller cell | 3 studies | 22% ± 6% | |
T cell | 3 studies | 28% ± 7% | |
vein endothelial cell | 3 studies | 21% ± 2% | |
GABAergic neuron | 3 studies | 38% ± 6% | |
glutamatergic neuron | 3 studies | 51% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 3089.25 | 653 / 653 | 99% | 33.13 | 601 / 605 |
esophagus | 99% | 2614.55 | 1434 / 1445 | 100% | 29.28 | 183 / 183 |
breast | 100% | 2298.94 | 459 / 459 | 98% | 18.97 | 1100 / 1118 |
brain | 98% | 1877.58 | 2593 / 2642 | 100% | 24.59 | 703 / 705 |
ovary | 100% | 2331.71 | 180 / 180 | 98% | 14.11 | 420 / 430 |
lung | 99% | 2763.00 | 575 / 578 | 98% | 21.28 | 1132 / 1155 |
adrenal gland | 100% | 4660.41 | 258 / 258 | 97% | 19.84 | 224 / 230 |
uterus | 100% | 2690.82 | 170 / 170 | 97% | 20.24 | 446 / 459 |
kidney | 99% | 1524.04 | 88 / 89 | 98% | 28.06 | 883 / 901 |
pancreas | 98% | 1738.55 | 321 / 328 | 98% | 19.30 | 174 / 178 |
bladder | 100% | 2136.57 | 21 / 21 | 90% | 12.68 | 454 / 504 |
skin | 96% | 3635.51 | 1735 / 1809 | 94% | 16.41 | 444 / 472 |
intestine | 98% | 1915.21 | 946 / 966 | 86% | 10.43 | 453 / 527 |
prostate | 94% | 1669.63 | 231 / 245 | 89% | 11.69 | 445 / 502 |
stomach | 86% | 1524.09 | 309 / 359 | 91% | 11.91 | 259 / 286 |
liver | 77% | 1024.03 | 174 / 226 | 85% | 10.93 | 344 / 406 |
blood vessel | 100% | 4309.01 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2199.27 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 3222.36 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2754.70 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 3261.90 | 835 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 17.71 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 93% | 18.36 | 74 / 80 |
lymph node | 0% | 0 | 0 / 0 | 66% | 5.16 | 19 / 29 |
peripheral blood | 23% | 256.81 | 215 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006986 | Biological process | response to unfolded protein |
GO_0009408 | Biological process | response to heat |
GO_0051085 | Biological process | chaperone cofactor-dependent protein refolding |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0030018 | Cellular component | Z disc |
GO_0051082 | Molecular function | unfolded protein binding |
GO_0051087 | Molecular function | protein-folding chaperone binding |
GO_0005515 | Molecular function | protein binding |
GO_0001671 | Molecular function | ATPase activator activity |
Gene name | DNAJB4 |
Protein name | DnaJ heat shock protein family (Hsp40) member B4 DnaJ (Hsp40) homolog, subfamily B, member 4, isoform CRA_b (cDNA FLJ50816, highly similar to DnaJ homolog subfamily B member 4) DnaJ homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) (HSP40 homolog) (Heat shock protein 40 homolog) (Human liver DnaJ-like protein) DnaJ-like heat shock protein |
Synonyms | hCG_22857 DNAJW HLJ1 |
Description | FUNCTION: Probable chaperone. Stimulates ATP hydrolysis and the folding of unfolded proteins mediated by HSPA1A/B (in vitro) . . |
Accessions | ENST00000426517.1 ENST00000370763.6 B4DNN2 Q9UDY4 Q6DKZ0 C9JUL4 |