Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 32% ± 14% | |
fibroblast | 14 studies | 29% ± 12% | |
microglial cell | 12 studies | 39% ± 13% | |
ciliated cell | 11 studies | 29% ± 14% | |
glutamatergic neuron | 11 studies | 51% ± 27% | |
astrocyte | 11 studies | 38% ± 17% | |
macrophage | 10 studies | 33% ± 14% | |
GABAergic neuron | 9 studies | 38% ± 22% | |
epithelial cell | 9 studies | 35% ± 16% | |
adipocyte | 9 studies | 34% ± 10% | |
smooth muscle cell | 9 studies | 25% ± 7% | |
pericyte | 8 studies | 28% ± 11% | |
oligodendrocyte | 8 studies | 27% ± 12% | |
oligodendrocyte precursor cell | 8 studies | 34% ± 13% | |
neuron | 7 studies | 32% ± 16% | |
dendritic cell | 6 studies | 21% ± 2% | |
myeloid cell | 6 studies | 24% ± 6% | |
mucus secreting cell | 5 studies | 24% ± 7% | |
cardiac muscle cell | 5 studies | 43% ± 9% | |
endothelial cell of lymphatic vessel | 5 studies | 30% ± 10% | |
club cell | 5 studies | 32% ± 10% | |
type I pneumocyte | 5 studies | 35% ± 10% | |
type II pneumocyte | 5 studies | 26% ± 7% | |
basal cell | 5 studies | 34% ± 21% | |
interneuron | 5 studies | 44% ± 25% | |
granule cell | 4 studies | 23% ± 8% | |
hepatocyte | 4 studies | 62% ± 20% | |
monocyte | 4 studies | 22% ± 2% | |
respiratory goblet cell | 4 studies | 31% ± 10% | |
erythrocyte | 4 studies | 45% ± 14% | |
goblet cell | 4 studies | 33% ± 27% | |
GABAergic interneuron | 3 studies | 22% ± 1% | |
retinal ganglion cell | 3 studies | 28% ± 11% | |
mesothelial cell | 3 studies | 38% ± 14% | |
retinal rod cell | 3 studies | 18% ± 2% | |
abnormal cell | 3 studies | 33% ± 20% | |
ependymal cell | 3 studies | 30% ± 13% | |
T cell | 3 studies | 21% ± 1% | |
alveolar macrophage | 3 studies | 27% ± 6% | |
transit amplifying cell | 3 studies | 41% ± 29% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 4007.37 | 180 / 180 | 100% | 32.76 | 430 / 430 |
uterus | 100% | 4376.05 | 170 / 170 | 100% | 41.96 | 459 / 459 |
breast | 100% | 4162.03 | 459 / 459 | 100% | 71.81 | 1117 / 1118 |
esophagus | 100% | 4854.13 | 1442 / 1445 | 100% | 33.05 | 183 / 183 |
liver | 100% | 4747.46 | 226 / 226 | 100% | 52.59 | 405 / 406 |
prostate | 100% | 4794.49 | 244 / 245 | 100% | 70.14 | 501 / 502 |
bladder | 100% | 4273.52 | 21 / 21 | 99% | 32.21 | 500 / 504 |
kidney | 100% | 3483.91 | 89 / 89 | 99% | 37.01 | 892 / 901 |
lung | 99% | 3524.86 | 573 / 578 | 100% | 41.59 | 1153 / 1155 |
thymus | 100% | 3412.72 | 651 / 653 | 99% | 36.77 | 600 / 605 |
intestine | 100% | 5261.54 | 966 / 966 | 99% | 27.80 | 521 / 527 |
stomach | 100% | 4302.43 | 359 / 359 | 98% | 25.87 | 280 / 286 |
skin | 100% | 4408.29 | 1803 / 1809 | 95% | 30.15 | 447 / 472 |
adrenal gland | 100% | 7794.87 | 258 / 258 | 94% | 27.15 | 216 / 230 |
brain | 93% | 3738.95 | 2449 / 2642 | 99% | 23.47 | 699 / 705 |
pancreas | 84% | 1500.60 | 275 / 328 | 99% | 33.74 | 176 / 178 |
adipose | 100% | 4712.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.48 | 29 / 29 |
muscle | 100% | 43021.04 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2931.87 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 40.19 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.28 | 1 / 1 |
blood vessel | 100% | 5010.32 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 10023.17 | 831 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 84% | 2330.74 | 778 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 16.29 | 65 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0080008 | Cellular component | Cul4-RING E3 ubiquitin ligase complex |
GO_0005925 | Cellular component | focal adhesion |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0030374 | Molecular function | nuclear receptor coactivator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | DCAF6 |
Protein name | DDB1- and CUL4-associated factor 6 (Androgen receptor complex-associated protein) (ARCAP) (IQ motif and WD repeat-containing protein 1) (Nuclear receptor interaction protein) (NRIP) DDB1 and CUL4 associated factor 6 |
Synonyms | MSTP055 IQWD1 |
Description | FUNCTION: Ligand-dependent coactivator of nuclear receptors. Enhance transcriptional activity of the nuclear receptors NR3C1 and AR. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex. . |
Accessions | ENST00000470721.5 ENST00000367843.7 [Q58WW2-2] ENST00000312263.10 [Q58WW2-1] ENST00000367840.4 [Q58WW2-3] F2Z305 ENST00000432587.6 [Q58WW2-4] Q58WW2 |