Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 16 studies | 27% ± 10% | |
astrocyte | 11 studies | 31% ± 14% | |
GABAergic neuron | 9 studies | 40% ± 22% | |
glutamatergic neuron | 9 studies | 46% ± 24% | |
oligodendrocyte precursor cell | 9 studies | 33% ± 15% | |
fibroblast | 9 studies | 22% ± 5% | |
oligodendrocyte | 9 studies | 27% ± 9% | |
adipocyte | 8 studies | 31% ± 9% | |
epithelial cell | 7 studies | 30% ± 11% | |
neuron | 6 studies | 34% ± 14% | |
interneuron | 6 studies | 42% ± 21% | |
macrophage | 6 studies | 26% ± 6% | |
microglial cell | 6 studies | 26% ± 8% | |
endothelial cell of lymphatic vessel | 5 studies | 22% ± 2% | |
smooth muscle cell | 5 studies | 21% ± 3% | |
type I pneumocyte | 5 studies | 21% ± 4% | |
retina horizontal cell | 4 studies | 18% ± 2% | |
cardiac muscle cell | 4 studies | 24% ± 2% | |
retinal rod cell | 4 studies | 17% ± 2% | |
club cell | 4 studies | 19% ± 3% | |
pericyte | 4 studies | 23% ± 3% | |
type II pneumocyte | 4 studies | 18% ± 3% | |
GABAergic interneuron | 3 studies | 26% ± 3% | |
granule cell | 3 studies | 26% ± 5% | |
amacrine cell | 3 studies | 17% ± 1% | |
ciliated cell | 3 studies | 23% ± 1% | |
glycinergic amacrine cell | 3 studies | 17% ± 1% | |
hepatocyte | 3 studies | 31% ± 17% | |
connective tissue cell | 3 studies | 17% ± 1% | |
alveolar macrophage | 3 studies | 21% ± 5% | |
monocyte | 3 studies | 21% ± 4% | |
lymphocyte | 3 studies | 20% ± 3% | |
basal cell | 3 studies | 29% ± 12% | |
mast cell | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2438.85 | 1445 / 1445 | 100% | 21.93 | 183 / 183 |
ovary | 100% | 2372.33 | 180 / 180 | 100% | 17.72 | 430 / 430 |
prostate | 100% | 2169.18 | 245 / 245 | 100% | 19.20 | 502 / 502 |
lung | 100% | 1978.71 | 578 / 578 | 100% | 16.69 | 1154 / 1155 |
breast | 100% | 2381.29 | 459 / 459 | 100% | 55.36 | 1115 / 1118 |
stomach | 100% | 1742.48 | 359 / 359 | 100% | 17.36 | 285 / 286 |
uterus | 100% | 2548.24 | 170 / 170 | 100% | 16.75 | 457 / 459 |
intestine | 100% | 2344.17 | 966 / 966 | 99% | 16.07 | 524 / 527 |
bladder | 100% | 2483.24 | 21 / 21 | 99% | 14.42 | 501 / 504 |
thymus | 100% | 2169.77 | 653 / 653 | 99% | 15.73 | 600 / 605 |
pancreas | 100% | 1531.25 | 328 / 328 | 99% | 12.41 | 176 / 178 |
adrenal gland | 100% | 3678.33 | 258 / 258 | 99% | 14.71 | 227 / 230 |
brain | 99% | 1322.89 | 2608 / 2642 | 100% | 13.09 | 703 / 705 |
kidney | 100% | 1566.94 | 89 / 89 | 98% | 15.29 | 884 / 901 |
liver | 100% | 1474.53 | 226 / 226 | 98% | 11.43 | 398 / 406 |
skin | 100% | 2658.95 | 1809 / 1809 | 93% | 13.45 | 437 / 472 |
adipose | 100% | 2373.69 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2367.40 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1785.34 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1608.70 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.64 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.99 | 1 / 1 |
peripheral blood | 98% | 1326.56 | 910 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 1249.98 | 836 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 8.87 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 78% | 7.32 | 62 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0005654 | Cellular component | nucleoplasm |
GO_0080008 | Cellular component | Cul4-RING E3 ubiquitin ligase complex |
GO_0005515 | Molecular function | protein binding |
Gene name | DCAF10 |
Protein name | DDB1- and CUL4-associated factor 10 (WD repeat-containing protein 32) |
Synonyms | WDR32 |
Description | FUNCTION: May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex. . FUNCTION: May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex. . |
Accessions | ENST00000377724.8 [Q5QP82-1] A0A0A0MQT4 Q5QP82 ENST00000242323.8 |