Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 17 studies | 33% ± 18% | |
endothelial cell | 14 studies | 33% ± 14% | |
fibroblast | 12 studies | 26% ± 10% | |
glutamatergic neuron | 9 studies | 37% ± 21% | |
microglial cell | 7 studies | 27% ± 4% | |
smooth muscle cell | 7 studies | 27% ± 13% | |
GABAergic neuron | 6 studies | 46% ± 21% | |
adipocyte | 5 studies | 20% ± 4% | |
endothelial cell of lymphatic vessel | 5 studies | 18% ± 5% | |
neuron | 4 studies | 22% ± 6% | |
astrocyte | 4 studies | 26% ± 9% | |
interneuron | 4 studies | 46% ± 17% | |
GABAergic interneuron | 3 studies | 24% ± 3% | |
macrophage | 3 studies | 20% ± 3% | |
type I pneumocyte | 3 studies | 25% ± 4% | |
mast cell | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 5606.12 | 1808 / 1809 | 100% | 143.88 | 472 / 472 |
esophagus | 100% | 3824.64 | 1445 / 1445 | 99% | 25.73 | 182 / 183 |
lung | 100% | 4475.68 | 577 / 578 | 99% | 27.99 | 1143 / 1155 |
prostate | 100% | 2443.93 | 244 / 245 | 99% | 28.30 | 497 / 502 |
thymus | 100% | 6738.54 | 653 / 653 | 98% | 28.66 | 594 / 605 |
brain | 98% | 3053.16 | 2595 / 2642 | 100% | 32.60 | 703 / 705 |
breast | 100% | 6168.19 | 459 / 459 | 98% | 26.77 | 1093 / 1118 |
stomach | 100% | 2502.42 | 359 / 359 | 97% | 21.22 | 278 / 286 |
intestine | 100% | 3550.34 | 966 / 966 | 97% | 17.27 | 510 / 527 |
ovary | 100% | 2993.93 | 180 / 180 | 97% | 18.22 | 415 / 430 |
kidney | 99% | 2404.72 | 88 / 89 | 97% | 20.35 | 875 / 901 |
uterus | 100% | 4026.16 | 170 / 170 | 94% | 19.31 | 432 / 459 |
adrenal gland | 99% | 2041.38 | 255 / 258 | 95% | 18.56 | 219 / 230 |
bladder | 100% | 3099.90 | 21 / 21 | 90% | 16.06 | 453 / 504 |
pancreas | 59% | 725.54 | 195 / 328 | 96% | 27.68 | 171 / 178 |
adipose | 100% | 6405.38 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7066.22 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 32.24 | 80 / 80 |
heart | 100% | 3847.81 | 860 / 861 | 0% | 0 | 0 / 0 |
spleen | 99% | 2467.44 | 239 / 241 | 0% | 0 | 0 / 0 |
muscle | 98% | 1920.36 | 785 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 14.02 | 43 / 45 |
liver | 11% | 125.58 | 25 / 226 | 47% | 5.14 | 190 / 406 |
lymph node | 0% | 0 | 0 / 0 | 41% | 3.78 | 12 / 29 |
peripheral blood | 25% | 754.09 | 234 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032012 | Biological process | regulation of ARF protein signal transduction |
GO_0045785 | Biological process | positive regulation of cell adhesion |
GO_0090162 | Biological process | establishment of epithelial cell polarity |
GO_0048193 | Biological process | Golgi vesicle transport |
GO_0001726 | Cellular component | ruffle |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005912 | Cellular component | adherens junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005547 | Molecular function | phosphatidylinositol-3,4,5-trisphosphate binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CYTH3 |
Protein name | CYTH3 protein Cytohesin-3 (ARF nucleotide-binding site opener 3) (Protein ARNO3) (General receptor of phosphoinositides 1) (Grp1) (PH, SEC7 and coiled-coil domain-containing protein 3) |
Synonyms | GRP1 PSCD3 ARNO3 |
Description | FUNCTION: Promotes guanine-nucleotide exchange on ARF1 and ARF6. Promotes the activation of ARF factors through replacement of GDP with GTP. Plays a role in the epithelial polarization (By similarity). . |
Accessions | O43739 Q96HS5 ENST00000350796.8 [O43739-2] |