Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 24% ± 9% | |
ciliated cell | 12 studies | 29% ± 13% | |
pericyte | 9 studies | 20% ± 5% | |
fibroblast | 7 studies | 20% ± 5% | |
epithelial cell | 6 studies | 35% ± 18% | |
basal cell | 6 studies | 26% ± 9% | |
smooth muscle cell | 5 studies | 20% ± 3% | |
endothelial cell of vascular tree | 5 studies | 19% ± 4% | |
deuterosomal cell | 4 studies | 23% ± 3% | |
squamous epithelial cell | 4 studies | 32% ± 24% | |
myofibroblast cell | 4 studies | 19% ± 2% | |
endothelial cell of artery | 4 studies | 18% ± 2% | |
secretory cell | 4 studies | 21% ± 6% | |
conventional dendritic cell | 3 studies | 18% ± 3% | |
connective tissue cell | 3 studies | 20% ± 4% | |
endothelial cell of lymphatic vessel | 3 studies | 30% ± 6% | |
type I pneumocyte | 3 studies | 25% ± 7% | |
glutamatergic neuron | 3 studies | 19% ± 1% | |
goblet cell | 3 studies | 19% ± 2% | |
neuron | 3 studies | 29% ± 15% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 4 studies | 23% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 3946.65 | 180 / 180 | 100% | 17.39 | 430 / 430 |
prostate | 100% | 6184.24 | 245 / 245 | 100% | 31.11 | 502 / 502 |
thymus | 100% | 15751.69 | 653 / 653 | 100% | 38.61 | 605 / 605 |
uterus | 100% | 4183.23 | 170 / 170 | 100% | 30.28 | 459 / 459 |
esophagus | 100% | 4375.51 | 1444 / 1445 | 100% | 15.73 | 183 / 183 |
lung | 100% | 5080.28 | 577 / 578 | 100% | 21.12 | 1154 / 1155 |
pancreas | 100% | 3262.21 | 327 / 328 | 100% | 32.23 | 178 / 178 |
bladder | 100% | 4039.10 | 21 / 21 | 100% | 30.92 | 502 / 504 |
skin | 100% | 4949.24 | 1809 / 1809 | 100% | 20.70 | 470 / 472 |
breast | 100% | 6493.75 | 459 / 459 | 100% | 32.74 | 1113 / 1118 |
kidney | 100% | 6434.96 | 89 / 89 | 99% | 22.26 | 896 / 901 |
intestine | 100% | 3960.14 | 966 / 966 | 99% | 21.97 | 524 / 527 |
stomach | 100% | 4258.38 | 359 / 359 | 99% | 17.85 | 284 / 286 |
brain | 99% | 3255.73 | 2622 / 2642 | 100% | 25.52 | 705 / 705 |
adrenal gland | 100% | 4355.09 | 258 / 258 | 99% | 24.10 | 228 / 230 |
liver | 93% | 1544.44 | 210 / 226 | 95% | 14.09 | 385 / 406 |
adipose | 100% | 4077.96 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 20.15 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.54 | 29 / 29 |
spleen | 100% | 4170.99 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.20 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.30 | 1 / 1 |
blood vessel | 100% | 4181.09 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 2055.28 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 2224.12 | 891 / 929 | 0% | 0 | 0 / 0 |
muscle | 90% | 1486.40 | 724 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0032012 | Biological process | regulation of ARF protein signal transduction |
GO_0006897 | Biological process | endocytosis |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005912 | Cellular component | adherens junction |
GO_0030426 | Cellular component | growth cone |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0070679 | Molecular function | inositol 1,4,5 trisphosphate binding |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0008289 | Molecular function | lipid binding |
Gene name | CYTH2 |
Protein name | Cytohesin-2 (PH, SEC7 and coiled-coil domain-containing protein 2) Cytohesin 2 Cytohesin-2 (ARF exchange factor) (ARF nucleotide-binding site opener) (Protein ARNO) (PH, SEC7 and coiled-coil domain-containing protein 2) Cytohesin 2 (Pleckstrin homology, Sec7 and coiled-coil domains 2 (Cytohesin-2), isoform CRA_c) |
Synonyms | hCG_1998017 ARNO PSCD2 PSCD2L |
Description | FUNCTION: Acts as a guanine-nucleotide exchange factor (GEF). Promotes guanine-nucleotide exchange on ARF1, ARF3 and ARF6. Activates ARF factors through replacement of GDP with GTP (By similarity). The cell membrane form, in association with ARL4 proteins, recruits ARF6 to the plasma membrane . Involved in neurite growth (By similarity). . |
Accessions | ENST00000325139.9 ENST00000595765.2 ENST00000391881.7 A0A0D9SFG6 A0A286YF81 A0A994J5E5 Q99418 ENST00000641098.1 [Q99418-1] ENST00000427476.4 ENST00000452733.7 [Q99418-2] ENST00000704950.1 G5E9B7 F8W8E2 M0R2J0 ENST00000460595.5 |