Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 14 studies | 41% ± 18% | |
astrocyte | 13 studies | 46% ± 21% | |
fibroblast | 12 studies | 26% ± 9% | |
endothelial cell | 11 studies | 28% ± 11% | |
glutamatergic neuron | 10 studies | 46% ± 25% | |
oligodendrocyte precursor cell | 8 studies | 35% ± 17% | |
mast cell | 8 studies | 21% ± 4% | |
GABAergic neuron | 7 studies | 47% ± 18% | |
oligodendrocyte | 7 studies | 34% ± 12% | |
smooth muscle cell | 7 studies | 18% ± 3% | |
epithelial cell | 6 studies | 42% ± 18% | |
retinal cone cell | 6 studies | 41% ± 10% | |
endothelial cell of lymphatic vessel | 6 studies | 25% ± 7% | |
type I pneumocyte | 6 studies | 32% ± 9% | |
type II pneumocyte | 6 studies | 39% ± 10% | |
macrophage | 6 studies | 18% ± 3% | |
neuron | 5 studies | 50% ± 20% | |
amacrine cell | 5 studies | 25% ± 2% | |
retina horizontal cell | 5 studies | 26% ± 2% | |
retinal rod cell | 5 studies | 42% ± 15% | |
club cell | 5 studies | 32% ± 11% | |
basal cell | 5 studies | 35% ± 16% | |
retinal ganglion cell | 4 studies | 23% ± 5% | |
Mueller cell | 4 studies | 40% ± 5% | |
abnormal cell | 4 studies | 30% ± 9% | |
interneuron | 4 studies | 62% ± 15% | |
myofibroblast cell | 3 studies | 28% ± 12% | |
retinal bipolar neuron | 3 studies | 23% ± 6% | |
mesothelial cell | 3 studies | 30% ± 8% | |
GABAergic amacrine cell | 3 studies | 24% ± 1% | |
adipocyte | 3 studies | 19% ± 4% | |
retinal pigment epithelial cell | 3 studies | 31% ± 15% | |
connective tissue cell | 3 studies | 26% ± 4% | |
pericyte | 3 studies | 21% ± 4% | |
granule cell | 3 studies | 35% ± 16% | |
mucus secreting cell | 3 studies | 24% ± 7% | |
microglial cell | 3 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1590.89 | 180 / 180 | 100% | 23.89 | 430 / 430 |
prostate | 100% | 1659.48 | 245 / 245 | 100% | 15.34 | 502 / 502 |
brain | 100% | 3433.66 | 2641 / 2642 | 100% | 39.66 | 705 / 705 |
thymus | 100% | 1950.86 | 653 / 653 | 100% | 29.80 | 604 / 605 |
intestine | 100% | 1383.69 | 966 / 966 | 99% | 19.56 | 524 / 527 |
kidney | 100% | 1708.44 | 89 / 89 | 99% | 16.96 | 895 / 901 |
stomach | 100% | 1271.67 | 359 / 359 | 99% | 17.21 | 284 / 286 |
bladder | 100% | 1308.71 | 21 / 21 | 99% | 16.77 | 500 / 504 |
lung | 99% | 1403.49 | 575 / 578 | 100% | 16.76 | 1151 / 1155 |
esophagus | 100% | 1184.72 | 1444 / 1445 | 99% | 13.06 | 181 / 183 |
breast | 100% | 1182.71 | 457 / 459 | 99% | 17.56 | 1106 / 1118 |
skin | 100% | 2530.91 | 1808 / 1809 | 99% | 14.80 | 465 / 472 |
pancreas | 98% | 744.20 | 322 / 328 | 100% | 17.03 | 178 / 178 |
adrenal gland | 100% | 1351.98 | 258 / 258 | 97% | 15.30 | 224 / 230 |
uterus | 100% | 1812.06 | 170 / 170 | 96% | 15.25 | 441 / 459 |
eye | 0% | 0 | 0 / 0 | 100% | 13.32 | 80 / 80 |
spleen | 100% | 833.08 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.01 | 1 / 1 |
blood vessel | 99% | 1074.51 | 1326 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 881.66 | 1188 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 10.81 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 93% | 10.98 | 42 / 45 |
heart | 92% | 807.76 | 794 / 861 | 0% | 0 | 0 / 0 |
liver | 23% | 110.98 | 53 / 226 | 41% | 4.06 | 168 / 406 |
muscle | 59% | 327.10 | 476 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 46% | 402.29 | 427 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0061635 | Biological process | regulation of protein complex stability |
GO_0034451 | Cellular component | centriolar satellite |
GO_0005874 | Cellular component | microtubule |
GO_0005737 | Cellular component | cytoplasm |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | CSTPP1 |
Protein name | Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 |
Synonyms | C11orf49 |
Description | FUNCTION: Regulator of the tubulin polyglutamylase complex (TPGC) that controls cytoskeletal organization, nuclear shape, and cilium disassembly by balancing microtubule and actin assembly . Regulates the assembly and stability of the TPGC and thereby modulates polyglutamylation of the microtubule, which antagonizes MAP4 binding . . |
Accessions | Q9H6J7 ENST00000527667.5 ENST00000525279.5 E9PI28 ENST00000534249.5 ENST00000532633.5 ENST00000526424.5 ENST00000527784.5 ENST00000278460.12 [Q9H6J7-1] ENST00000528488.5 ENST00000525895.5 E9PQS2 ENST00000395460.6 [Q9H6J7-3] ENST00000378618.6 [Q9H6J7-4] H0YDJ0 H0YDE7 ENST00000378615.7 [Q9H6J7-2] E9PQA0 E9PI12 ENST00000526827.1 |