Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 18 studies | 41% ± 21% | |
basal cell | 13 studies | 35% ± 16% | |
epithelial cell | 10 studies | 41% ± 17% | |
connective tissue cell | 8 studies | 48% ± 28% | |
secretory cell | 8 studies | 46% ± 15% | |
mesothelial cell | 4 studies | 25% ± 13% | |
smooth muscle cell | 4 studies | 44% ± 9% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 44% ± 8% | |
myofibroblast cell | 3 studies | 45% ± 11% | |
progenitor cell | 3 studies | 34% ± 16% | |
abnormal cell | 3 studies | 45% ± 5% | |
club cell | 3 studies | 30% ± 3% | |
keratinocyte | 3 studies | 27% ± 2% | |
progenitor cell of mammary luminal epithelium | 3 studies | 36% ± 9% | |
ciliated cell | 3 studies | 23% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 79% | 2714.64 | 364 / 459 | 93% | 1826.44 | 1039 / 1118 |
uterus | 71% | 2157.38 | 121 / 170 | 81% | 991.63 | 373 / 459 |
bladder | 67% | 1384.95 | 14 / 21 | 55% | 620.05 | 279 / 504 |
ovary | 14% | 92.52 | 26 / 180 | 97% | 1563.93 | 416 / 430 |
skin | 98% | 4937.21 | 1770 / 1809 | 11% | 65.64 | 53 / 472 |
thymus | 41% | 463.67 | 265 / 653 | 63% | 282.58 | 380 / 605 |
ureter | 0% | 0 | 0 / 0 | 100% | 907.57 | 1 / 1 |
esophagus | 60% | 15213.73 | 867 / 1445 | 38% | 199.36 | 69 / 183 |
prostate | 76% | 1341.19 | 186 / 245 | 8% | 20.99 | 42 / 502 |
tonsil | 0% | 0 | 0 / 0 | 67% | 301.73 | 30 / 45 |
lung | 13% | 109.79 | 73 / 578 | 51% | 383.92 | 589 / 1155 |
adipose | 52% | 765.48 | 629 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 1% | 6.86 | 4 / 328 | 46% | 217.47 | 82 / 178 |
brain | 41% | 308.27 | 1084 / 2642 | 2% | 13.59 | 11 / 705 |
kidney | 28% | 245.53 | 25 / 89 | 3% | 12.66 | 24 / 901 |
intestine | 21% | 216.65 | 207 / 966 | 9% | 38.61 | 47 / 527 |
adrenal gland | 20% | 125.00 | 52 / 258 | 6% | 29.61 | 14 / 230 |
spleen | 22% | 182.27 | 54 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 18% | 143.96 | 245 / 1335 | 0% | 0 | 0 / 0 |
stomach | 6% | 55.96 | 22 / 359 | 4% | 9.50 | 12 / 286 |
muscle | 5% | 41.78 | 43 / 803 | 0% | 0 | 0 / 0 |
heart | 4% | 37.72 | 36 / 861 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 1% | 2.62 | 4 / 406 |
peripheral blood | 1% | 5.02 | 6 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008544 | Biological process | epidermis development |
GO_0007165 | Biological process | signal transduction |
GO_0042573 | Biological process | retinoic acid metabolic process |
GO_0035115 | Biological process | embryonic forelimb morphogenesis |
GO_0015908 | Biological process | fatty acid transport |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0048672 | Biological process | positive regulation of collateral sprouting |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0019841 | Molecular function | retinol binding |
GO_0005504 | Molecular function | fatty acid binding |
GO_0016918 | Molecular function | retinal binding |
GO_0001972 | Molecular function | retinoic acid binding |
GO_0005501 | Molecular function | retinoid binding |
GO_0005515 | Molecular function | protein binding |
GO_0030332 | Molecular function | cyclin binding |
Gene name | CRABP2 |
Protein name | Cellular retinoic acid-binding protein 2 (Cellular retinoic acid-binding protein II) (CRABP-II) Cellular retinoic acid-binding protein 2 |
Synonyms | |
Description | FUNCTION: Transports retinoic acid to the nucleus. Regulates the access of retinoic acid to the nuclear retinoic acid receptors. |
Accessions | ENST00000368221.1 ENST00000368220.1 P29373 ENST00000368222.8 ENST00000621784.4 Q5SYZ4 |