Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 4 studies | 26% ± 8% |
Insufficient scRNA-seq data for expression of COMP at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 42% | 1113.26 | 193 / 459 | 88% | 163.76 | 983 / 1118 |
skin | 76% | 5248.92 | 1368 / 1809 | 36% | 36.52 | 170 / 472 |
prostate | 41% | 1153.02 | 100 / 245 | 66% | 67.34 | 329 / 502 |
ureter | 0% | 0 | 0 / 0 | 100% | 47.23 | 1 / 1 |
blood vessel | 97% | 22104.89 | 1300 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 4% | 58.82 | 12 / 328 | 87% | 180.05 | 155 / 178 |
thymus | 37% | 1124.87 | 242 / 653 | 48% | 49.37 | 290 / 605 |
lung | 37% | 727.60 | 213 / 578 | 44% | 34.48 | 503 / 1155 |
adipose | 64% | 5666.77 | 772 / 1204 | 0% | 0 | 0 / 0 |
bladder | 19% | 342.43 | 4 / 21 | 41% | 55.84 | 206 / 504 |
ovary | 1% | 20.22 | 2 / 180 | 47% | 51.49 | 201 / 430 |
uterus | 9% | 177.69 | 16 / 170 | 37% | 53.52 | 168 / 459 |
stomach | 7% | 151.15 | 26 / 359 | 34% | 33.73 | 96 / 286 |
heart | 39% | 2987.44 | 339 / 861 | 0% | 0 | 0 / 0 |
intestine | 5% | 106.10 | 48 / 966 | 31% | 25.65 | 166 / 527 |
esophagus | 19% | 394.31 | 281 / 1445 | 13% | 7.65 | 24 / 183 |
tonsil | 0% | 0 | 0 / 0 | 24% | 8.11 | 11 / 45 |
lymph node | 0% | 0 | 0 / 0 | 24% | 21.70 | 7 / 29 |
kidney | 16% | 557.60 | 14 / 89 | 6% | 3.30 | 54 / 901 |
muscle | 20% | 1225.24 | 159 / 803 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 12% | 9.65 | 28 / 230 |
liver | 0% | 5.09 | 1 / 226 | 11% | 5.80 | 44 / 406 |
brain | 4% | 48.48 | 97 / 2642 | 0% | 0.26 | 2 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0048844 | Biological process | artery morphogenesis |
GO_0010468 | Biological process | regulation of gene expression |
GO_0006986 | Biological process | response to unfolded protein |
GO_0051260 | Biological process | protein homooligomerization |
GO_0003417 | Biological process | growth plate cartilage development |
GO_0035989 | Biological process | tendon development |
GO_0070527 | Biological process | platelet aggregation |
GO_0009887 | Biological process | animal organ morphogenesis |
GO_0060173 | Biological process | limb development |
GO_0035988 | Biological process | chondrocyte proliferation |
GO_0016485 | Biological process | protein processing |
GO_0030500 | Biological process | regulation of bone mineralization |
GO_0035264 | Biological process | multicellular organism growth |
GO_0097084 | Biological process | vascular associated smooth muscle cell development |
GO_0014829 | Biological process | vascular associated smooth muscle contraction |
GO_1990079 | Biological process | cartilage homeostasis |
GO_0002063 | Biological process | chondrocyte development |
GO_0030509 | Biological process | BMP signaling pathway |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_1902732 | Biological process | positive regulation of chondrocyte proliferation |
GO_0030282 | Biological process | bone mineralization |
GO_1900047 | Biological process | negative regulation of hemostasis |
GO_0006915 | Biological process | apoptotic process |
GO_0001501 | Biological process | skeletal system development |
GO_0090398 | Biological process | cellular senescence |
GO_0030199 | Biological process | collagen fibril organization |
GO_0050881 | Biological process | musculoskeletal movement |
GO_0043588 | Biological process | skin development |
GO_0009306 | Biological process | protein secretion |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0070062 | Cellular component | extracellular exosome |
GO_0032991 | Cellular component | protein-containing complex |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0031012 | Cellular component | extracellular matrix |
GO_0008201 | Molecular function | heparin binding |
GO_0005201 | Molecular function | extracellular matrix structural constituent |
GO_0005178 | Molecular function | integrin binding |
GO_0002020 | Molecular function | protease binding |
GO_0036122 | Molecular function | BMP binding |
GO_0043395 | Molecular function | heparan sulfate proteoglycan binding |
GO_0043394 | Molecular function | proteoglycan binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005518 | Molecular function | collagen binding |
GO_0005515 | Molecular function | protein binding |
Gene name | COMP |
Protein name | Cartilage oligomeric matrix protein (COMP) (Thrombospondin-5) (TSP5) Cartilage oligomeric matrix protein Alternative protein COMP |
Synonyms | hCG_37043 |
Description | FUNCTION: Plays a role in the structural integrity of cartilage via its interaction with other extracellular matrix proteins such as the collagens and fibronectin. Can mediate the interaction of chondrocytes with the cartilage extracellular matrix through interaction with cell surface integrin receptors . Could play a role in the pathogenesis of osteoarthritis . Potent suppressor of apoptosis in both primary chondrocytes and transformed cells. Suppresses apoptosis by blocking the activation of caspase-3 and by inducing the IAP family of survival proteins (BIRC3, BIRC2, BIRC5 and XIAP) . Essential for maintaining a vascular smooth muscle cells (VSMCs) contractile/differentiated phenotype under physiological and pathological stimuli. Maintains this phenotype of VSMCs by interacting with ITGA7 (By similarity). . |
Accessions | ENST00000542601.6 L8E6U6 P49747 ENST00000222271.7 [P49747-1] ENST00000425807.1 [P49747-2] G3XAP6 |