CNIH4 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
non-classical monocyte	22 studies	39% ± 13%	Explore
classical monocyte	19 studies	25% ± 10%	Explore
endothelial cell	19 studies	25% ± 9%	Explore
fibroblast	16 studies	24% ± 9%	Explore
epithelial cell	14 studies	32% ± 17%	Explore
monocyte	13 studies	20% ± 8%	Explore
endothelial cell of lymphatic vessel	13 studies	23% ± 9%	Explore
macrophage	13 studies	24% ± 9%	Explore
pericyte	13 studies	21% ± 5%	Explore
basal cell	10 studies	33% ± 15%	Explore
type I pneumocyte	8 studies	29% ± 11%	Explore
ciliated cell	8 studies	39% ± 13%	Explore
type II pneumocyte	7 studies	34% ± 19%	Explore
connective tissue cell	7 studies	20% ± 2%	Explore
endothelial cell of artery	7 studies	18% ± 2%	Explore
smooth muscle cell	7 studies	21% ± 4%	Explore
CD8-positive, alpha-beta T cell	6 studies	17% ± 1%	Explore
CD4-positive, alpha-beta T cell	5 studies	19% ± 3%	Explore
enterocyte	5 studies	23% ± 4%	Explore
vein endothelial cell	5 studies	18% ± 2%	Explore
abnormal cell	5 studies	31% ± 14%	Explore
myeloid cell	5 studies	27% ± 10%	Explore
capillary endothelial cell	5 studies	19% ± 2%	Explore
endothelial cell of vascular tree	5 studies	21% ± 4%	Explore
secretory cell	5 studies	32% ± 19%	Explore
myofibroblast cell	4 studies	20% ± 4%	Explore
natural killer cell	4 studies	17% ± 2%	Explore
alveolar macrophage	4 studies	28% ± 6%	Explore
glutamatergic neuron	4 studies	28% ± 10%	Explore
dendritic cell	4 studies	27% ± 12%	Explore
ionocyte	3 studies	22% ± 6%	Explore
conventional dendritic cell	3 studies	31% ± 10%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	16% ± 0%	Explore
renal alpha-intercalated cell	3 studies	27% ± 8%	Explore
extravillous trophoblast	3 studies	20% ± 2%	Explore
club cell	3 studies	34% ± 10%	Explore
progenitor cell	3 studies	18% ± 1%	Explore
kidney loop of Henle epithelial cell	3 studies	20% ± 2%	Explore
intermediate monocyte	3 studies	49% ± 6%	Explore
GABAergic neuron	3 studies	24% ± 6%	Explore
enteroendocrine cell	3 studies	19% ± 3%	Explore
goblet cell	3 studies	21% ± 4%	Explore
intestinal crypt stem cell	3 studies	22% ± 6%	Explore
oligodendrocyte precursor cell	3 studies	17% ± 2%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	10 studies	29% ± 13%	Explore
peripheral blood	7 studies	20% ± 4%	Explore
kidney	5 studies	18% ± 1%	Explore
brain	5 studies	21% ± 5%	Explore
liver	4 studies	24% ± 12%	Explore
pancreas	3 studies	22% ± 5%	Explore
placenta	3 studies	21% ± 4%	Explore
bone marrow	3 studies	17% ± 1%	Explore
intestine	3 studies	23% ± 9%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	2086.36	1445 / 1445	100%	27.79	183 / 183
lung	100%	2209.45	578 / 578	100%	38.91	1155 / 1155
ovary	100%	1571.39	180 / 180	100%	25.55	430 / 430
stomach	100%	1312.55	359 / 359	100%	25.63	286 / 286
uterus	100%	1733.31	170 / 170	100%	33.95	459 / 459
breast	100%	1813.06	459 / 459	100%	39.98	1117 / 1118
kidney	100%	1759.53	89 / 89	100%	29.63	900 / 901
intestine	100%	1903.34	966 / 966	100%	28.22	526 / 527
bladder	100%	1912.10	21 / 21	100%	33.35	503 / 504
prostate	100%	1499.46	245 / 245	100%	17.58	501 / 502
skin	100%	2420.00	1809 / 1809	100%	32.98	471 / 472
thymus	100%	1319.51	652 / 653	100%	21.28	603 / 605
brain	99%	1146.00	2627 / 2642	100%	20.69	705 / 705
adrenal gland	100%	1738.73	258 / 258	99%	20.83	227 / 230
liver	99%	826.31	224 / 226	100%	21.92	404 / 406
pancreas	95%	643.40	310 / 328	99%	24.81	177 / 178
adipose	100%	1940.72	1204 / 1204	0%	0	0 / 0
blood vessel	100%	2172.39	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	14.16	29 / 29
spleen	100%	1614.68	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	25.76	45 / 45
ureter	0%	0	0 / 0	100%	27.94	1 / 1
muscle	100%	1490.25	801 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	99%	23.26	79 / 80
heart	98%	1130.60	843 / 861	0%	0	0 / 0
peripheral blood	94%	1915.49	869 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0015031	Biological process	protein transport
GO_0006888	Biological process	endoplasmic reticulum to Golgi vesicle-mediated transport
GO_0005783	Cellular component	endoplasmic reticulum
GO_0030134	Cellular component	COPII-coated ER to Golgi transport vesicle
GO_0005793	Cellular component	endoplasmic reticulum-Golgi intermediate compartment
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0031730	Molecular function	CCR5 chemokine receptor binding
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	CNIH4
Protein name	Protein cornichon homolog 4 (Cornichon family AMPA receptor auxiliary protein 4) Protein cornichon homolog 4 (CNIH-4) (Cornichon family AMPA receptor auxiliary protein 4)
Synonyms	HSPC163
Description	FUNCTION: Involved in G protein-coupled receptors (GPCRs) trafficking from the endoplasmic reticulum to the cell surface; it promotes the exit of GPCRs from the early secretory pathway, likely through interaction with the COPII machinery . .
Accessions	A6NLH6 ENST00000366858.7 ENST00000465271.6 [Q9P003-1] ENST00000366856.3 A6NJ96 Q9P003 ENST00000366857.9 [Q9P003-2]

CNIH4 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review