Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 32 studies | 33% ± 17% | |
endothelial cell | 24 studies | 30% ± 15% | |
fibroblast | 14 studies | 25% ± 8% | |
oligodendrocyte | 13 studies | 46% ± 18% | |
oligodendrocyte precursor cell | 12 studies | 36% ± 18% | |
microglial cell | 12 studies | 50% ± 21% | |
glutamatergic neuron | 11 studies | 46% ± 20% | |
monocyte | 10 studies | 31% ± 13% | |
endothelial cell of lymphatic vessel | 10 studies | 28% ± 12% | |
astrocyte | 10 studies | 37% ± 17% | |
neuron | 10 studies | 46% ± 18% | |
myeloid cell | 10 studies | 38% ± 13% | |
dendritic cell | 9 studies | 33% ± 12% | |
GABAergic neuron | 9 studies | 43% ± 21% | |
pericyte | 9 studies | 29% ± 14% | |
classical monocyte | 8 studies | 25% ± 6% | |
conventional dendritic cell | 8 studies | 23% ± 8% | |
interneuron | 6 studies | 61% ± 17% | |
adipocyte | 6 studies | 22% ± 6% | |
alveolar macrophage | 5 studies | 45% ± 23% | |
non-classical monocyte | 5 studies | 23% ± 6% | |
epithelial cell | 5 studies | 23% ± 5% | |
retinal ganglion cell | 5 studies | 46% ± 16% | |
amacrine cell | 5 studies | 32% ± 13% | |
retina horizontal cell | 5 studies | 35% ± 19% | |
type II pneumocyte | 5 studies | 21% ± 6% | |
B cell | 4 studies | 20% ± 4% | |
naive B cell | 4 studies | 19% ± 2% | |
abnormal cell | 4 studies | 30% ± 11% | |
granule cell | 4 studies | 41% ± 5% | |
smooth muscle cell | 4 studies | 22% ± 6% | |
cardiac muscle cell | 4 studies | 20% ± 1% | |
mononuclear phagocyte | 4 studies | 31% ± 15% | |
ciliated cell | 4 studies | 24% ± 5% | |
mast cell | 4 studies | 25% ± 8% | |
hematopoietic precursor cell | 3 studies | 29% ± 9% | |
glial cell | 3 studies | 28% ± 10% | |
progenitor cell | 3 studies | 42% ± 11% | |
capillary endothelial cell | 3 studies | 21% ± 5% | |
myofibroblast cell | 3 studies | 28% ± 12% | |
GABAergic amacrine cell | 3 studies | 42% ± 16% | |
OFF-bipolar cell | 3 studies | 30% ± 11% | |
ON-bipolar cell | 3 studies | 31% ± 10% | |
glycinergic amacrine cell | 3 studies | 39% ± 14% | |
rod bipolar cell | 3 studies | 30% ± 10% | |
lymphocyte | 3 studies | 17% ± 1% | |
connective tissue cell | 3 studies | 23% ± 7% | |
neutrophil | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3396.53 | 2629 / 2642 | 100% | 23.73 | 704 / 705 |
lung | 100% | 2843.35 | 578 / 578 | 99% | 8.77 | 1139 / 1155 |
thymus | 100% | 3171.42 | 653 / 653 | 98% | 10.45 | 595 / 605 |
breast | 100% | 1912.71 | 459 / 459 | 98% | 10.63 | 1095 / 1118 |
esophagus | 96% | 1240.40 | 1391 / 1445 | 99% | 10.06 | 182 / 183 |
skin | 99% | 2686.81 | 1783 / 1809 | 97% | 22.72 | 458 / 472 |
uterus | 100% | 1946.82 | 170 / 170 | 92% | 7.31 | 423 / 459 |
ovary | 100% | 2230.60 | 180 / 180 | 92% | 5.06 | 396 / 430 |
adrenal gland | 100% | 1559.07 | 257 / 258 | 91% | 7.36 | 209 / 230 |
prostate | 99% | 1253.33 | 243 / 245 | 88% | 4.45 | 441 / 502 |
bladder | 100% | 1588.48 | 21 / 21 | 80% | 5.01 | 404 / 504 |
kidney | 89% | 839.51 | 79 / 89 | 89% | 7.10 | 804 / 901 |
intestine | 95% | 1480.15 | 920 / 966 | 70% | 3.80 | 367 / 527 |
stomach | 76% | 803.40 | 272 / 359 | 78% | 5.53 | 224 / 286 |
liver | 71% | 492.85 | 160 / 226 | 60% | 3.25 | 243 / 406 |
pancreas | 28% | 185.18 | 91 / 328 | 96% | 8.02 | 170 / 178 |
adipose | 100% | 2399.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 1883.79 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.73 | 1 / 1 |
blood vessel | 100% | 2091.97 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1401.38 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 1234.89 | 819 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 5.38 | 40 / 45 |
peripheral blood | 83% | 1670.66 | 772 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 6.14 | 24 / 29 |
eye | 0% | 0 | 0 / 0 | 75% | 4.25 | 60 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005814 | Cellular component | centriole |
GO_0005813 | Cellular component | centrosome |
GO_0120103 | Cellular component | centriolar subdistal appendage |
GO_0005829 | Cellular component | cytosol |
GO_0005874 | Cellular component | microtubule |
GO_0005819 | Cellular component | spindle |
GO_0005515 | Molecular function | protein binding |
Gene name | CEP170 |
Protein name | Centrosomal protein 170kDa Centrosomal protein 170 CEP170 protein Centrosomal protein of 170 kDa (Cep170) (KARP-1-binding protein) (KARP1-binding protein) |
Synonyms | KAB KIAA0470 FAM68A |
Description | FUNCTION: Plays a role in microtubule organization . Required for centriole subdistal appendage assembly . . |
Accessions | H0Y4T4 E5RFU8 ENST00000366543.5 [Q5SW79-2] ENST00000336415.8 ENST00000450306.5 [Q5SW79-3] E5RG47 ENST00000522191.5 ENST00000523424.5 H0YB66 ENST00000413359.6 ENST00000464936.5 H0Y2V6 ENST00000492145.1 E7EMW0 ENST00000612450.4 [Q5SW79-1] B2RTS4 ENST00000621831.4 [Q5SW79-2] ENST00000522895.1 ENST00000461671.1 ENST00000366544.5 [Q5SW79-3] ENST00000366542.6 [Q5SW79-1] E5RJT5 Q6AZE1 ENST00000490813.5 H0YB92 Q5SW79 ENST00000522995.1 E5RIH6 E7EWM2 E5RGW7 A6H8X9 ENST00000481987.5 |