Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 11 studies | 34% ± 14% | |
GABAergic neuron | 5 studies | 32% ± 10% | |
interneuron | 5 studies | 32% ± 15% | |
neuron | 4 studies | 32% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 30% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 7406.94 | 2598 / 2642 | 100% | 81.15 | 702 / 705 |
skin | 14% | 97.61 | 261 / 1809 | 99% | 50.08 | 466 / 472 |
esophagus | 38% | 501.30 | 551 / 1445 | 67% | 10.67 | 123 / 183 |
spleen | 100% | 2431.26 | 240 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 43.67 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 93% | 12.65 | 42 / 45 |
lymph node | 0% | 0 | 0 / 0 | 86% | 25.07 | 25 / 29 |
adrenal gland | 9% | 62.68 | 23 / 258 | 74% | 13.47 | 171 / 230 |
uterus | 2% | 18.39 | 4 / 170 | 75% | 9.21 | 342 / 459 |
lung | 1% | 6.39 | 7 / 578 | 63% | 7.84 | 723 / 1155 |
pancreas | 0% | 1.47 | 1 / 328 | 60% | 7.62 | 107 / 178 |
breast | 0% | 0 | 0 / 459 | 58% | 5.14 | 649 / 1118 |
bladder | 0% | 0 | 0 / 21 | 45% | 5.56 | 227 / 504 |
peripheral blood | 45% | 1287.30 | 417 / 929 | 0% | 0 | 0 / 0 |
intestine | 10% | 133.80 | 95 / 966 | 32% | 2.43 | 169 / 527 |
kidney | 2% | 11.28 | 2 / 89 | 33% | 2.07 | 294 / 901 |
prostate | 0% | 2.46 | 1 / 245 | 32% | 2.09 | 160 / 502 |
stomach | 0% | 1.86 | 1 / 359 | 29% | 2.09 | 84 / 286 |
thymus | 2% | 16.88 | 13 / 653 | 16% | 1.51 | 94 / 605 |
ovary | 4% | 21.44 | 7 / 180 | 12% | 0.70 | 51 / 430 |
muscle | 12% | 83.58 | 100 / 803 | 0% | 0 | 0 / 0 |
liver | 0% | 2.25 | 1 / 226 | 11% | 0.77 | 43 / 406 |
adipose | 1% | 4.40 | 8 / 1204 | 0% | 0 | 0 / 0 |
heart | 0% | 2.65 | 4 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 2.38 | 5 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045664 | Biological process | regulation of neuron differentiation |
GO_0018105 | Biological process | peptidyl-serine phosphorylation |
GO_0048013 | Biological process | ephrin receptor signaling pathway |
GO_0021766 | Biological process | hippocampus development |
GO_0007213 | Biological process | G protein-coupled acetylcholine receptor signaling pathway |
GO_0031175 | Biological process | neuron projection development |
GO_0000079 | Biological process | regulation of cyclin-dependent protein serine/threonine kinase activity |
GO_0035235 | Biological process | ionotropic glutamate receptor signaling pathway |
GO_0018107 | Biological process | peptidyl-threonine phosphorylation |
GO_0021819 | Biological process | layer formation in cerebral cortex |
GO_0001764 | Biological process | neuron migration |
GO_0009792 | Biological process | embryo development ending in birth or egg hatching |
GO_0031116 | Biological process | positive regulation of microtubule polymerization |
GO_0043525 | Biological process | positive regulation of neuron apoptotic process |
GO_0007413 | Biological process | axonal fasciculation |
GO_0030182 | Biological process | neuron differentiation |
GO_0061001 | Biological process | regulation of dendritic spine morphogenesis |
GO_0021722 | Biological process | superior olivary nucleus maturation |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0090314 | Biological process | positive regulation of protein targeting to membrane |
GO_0070315 | Biological process | G1 to G0 transition involved in cell differentiation |
GO_0098693 | Biological process | regulation of synaptic vesicle cycle |
GO_0021549 | Biological process | cerebellum development |
GO_0007420 | Biological process | brain development |
GO_0016241 | Biological process | regulation of macroautophagy |
GO_0007158 | Biological process | neuron cell-cell adhesion |
GO_0048511 | Biological process | rhythmic process |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0032956 | Biological process | regulation of actin cytoskeleton organization |
GO_0007411 | Biological process | axon guidance |
GO_0016533 | Cellular component | protein kinase 5 complex |
GO_0098793 | Cellular component | presynapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0031594 | Cellular component | neuromuscular junction |
GO_0043197 | Cellular component | dendritic spine |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0016020 | Cellular component | membrane |
GO_0043204 | Cellular component | perikaryon |
GO_0005654 | Cellular component | nucleoplasm |
GO_0043025 | Cellular component | neuronal cell body |
GO_0043005 | Cellular component | neuron projection |
GO_0030425 | Cellular component | dendrite |
GO_0043292 | Cellular component | contractile muscle fiber |
GO_0000307 | Cellular component | cyclin-dependent protein kinase holoenzyme complex |
GO_0005829 | Cellular component | cytosol |
GO_0014069 | Cellular component | postsynaptic density |
GO_0030426 | Cellular component | growth cone |
GO_0005737 | Cellular component | cytoplasm |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0030424 | Cellular component | axon |
GO_0005634 | Cellular component | nucleus |
GO_0061575 | Molecular function | cyclin-dependent protein serine/threonine kinase activator activity |
GO_0048487 | Molecular function | beta-tubulin binding |
GO_0046875 | Molecular function | ephrin receptor binding |
GO_0045296 | Molecular function | cadherin binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0004672 | Molecular function | protein kinase activity |
GO_0002020 | Molecular function | protease binding |
GO_0043539 | Molecular function | protein serine/threonine kinase activator activity |
GO_0030295 | Molecular function | protein kinase activator activity |
GO_0043014 | Molecular function | alpha-tubulin binding |
GO_0016301 | Molecular function | kinase activity |
GO_0035255 | Molecular function | ionotropic glutamate receptor binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CDK5R1 |
Protein name | Cyclin-dependent kinase 5 activator 1 (CDK5 activator 1) (Cyclin-dependent kinase 5 regulatory subunit 1) (TPKII regulatory subunit) [Cleaved into: Cyclin-dependent kinase 5 activator 1, p35 (p35); Cyclin-dependent kinase 5 activator 1, p25 (p25) (Tau protein kinase II 23 kDa subunit) (p23)] Cyclin dependent kinase 5 regulatory subunit 1 Cyclin-dependent kinase 5 activator |
Synonyms | NCK5A CDK5R |
Description | FUNCTION: p35 is a neuron specific activator of CDK5. The complex p35/CDK5 is required for neurite outgrowth and cortical lamination. Involved in dendritic spine morphogenesis by mediating the EFNA1-EPHA4 signaling. Activator of TPKII. The complex p35/CDK5 participates in the regulation of the circadian clock by modulating the function of CLOCK protein: phosphorylates CLOCK at 'Thr-451' and 'Thr-461' and regulates the transcriptional activity of the CLOCK-BMAL1 heterodimer in association with altered stability and subcellular distribution. . FUNCTION: p35 is a neuron specific activator of CDK5. The complex p35/CDK5 is required for neurite outgrowth and cortical lamination. Involved in dendritic spine morphogenesis by mediating the EFNA1-EPHA4 signaling. Activator of TPKII. The complex p35/CDK5 participates in the regulation of the circadian clock by modulating the function of CLOCK protein: phosphorylates CLOCK at 'Thr-451' and 'Thr-461' and regulates the transcriptional activity of the CLOCK-BMAL1 heterodimer in association with altered stability and subcellular distribution. . FUNCTION: p35 is a neuron specific activator of CDK5. The complex p35/CDK5 is required for neurite outgrowth and cortical lamination. Involved in dendritic spine morphogenesis by mediating the EFNA1-EPHA4 signaling. Activator of TPKII. The complex p35/CDK5 participates in the regulation of the circadian clock by modulating the function of CLOCK protein: phosphorylates CLOCK at 'Thr-451' and 'Thr-461' and regulates the transcriptional activity of the CLOCK-BMAL1 heterodimer in association with altered stability and subcellular distribution. . |
Accessions | Q15078 Q8N619 Q8TAM4 ENST00000584792.5 J3QRB5 ENST00000313401.4 ENST00000584716.1 |