Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4558.59 | 1445 / 1445 | 100% | 36.70 | 183 / 183 |
ovary | 100% | 4329.14 | 180 / 180 | 100% | 44.14 | 430 / 430 |
skin | 100% | 4089.66 | 1809 / 1809 | 100% | 87.95 | 472 / 472 |
thymus | 100% | 5944.87 | 653 / 653 | 100% | 104.78 | 605 / 605 |
uterus | 100% | 4992.69 | 170 / 170 | 100% | 83.87 | 459 / 459 |
brain | 100% | 4286.00 | 2641 / 2642 | 100% | 117.66 | 705 / 705 |
kidney | 100% | 4620.27 | 89 / 89 | 100% | 72.62 | 899 / 901 |
pancreas | 100% | 2686.47 | 327 / 328 | 100% | 79.41 | 178 / 178 |
lung | 100% | 4452.19 | 578 / 578 | 100% | 66.55 | 1151 / 1155 |
breast | 100% | 4009.37 | 459 / 459 | 100% | 89.68 | 1114 / 1118 |
intestine | 100% | 4923.22 | 966 / 966 | 99% | 63.34 | 524 / 527 |
prostate | 100% | 5461.53 | 245 / 245 | 99% | 71.82 | 499 / 502 |
bladder | 100% | 4595.00 | 21 / 21 | 99% | 79.65 | 500 / 504 |
liver | 100% | 1772.04 | 226 / 226 | 99% | 42.19 | 402 / 406 |
adrenal gland | 100% | 5612.95 | 258 / 258 | 99% | 79.29 | 227 / 230 |
stomach | 100% | 3835.60 | 359 / 359 | 99% | 51.61 | 282 / 286 |
adipose | 100% | 3679.22 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4045.80 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 70.96 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 142.12 | 29 / 29 |
muscle | 100% | 3759.93 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6245.41 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 70.09 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 45.15 | 1 / 1 |
heart | 100% | 2756.36 | 857 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3938.11 | 915 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000244 | Biological process | spliceosomal tri-snRNP complex assembly |
GO_0046540 | Cellular component | U4/U6 x U5 tri-snRNP complex |
GO_0016607 | Cellular component | nuclear speck |
GO_0005682 | Cellular component | U5 snRNP |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0001650 | Cellular component | fibrillar center |
GO_0005634 | Cellular component | nucleus |
GO_0043021 | Molecular function | ribonucleoprotein complex binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CD2BP2 |
Protein name | CD2 binding protein 2 isoform 2 CD2 binding protein 2 isoform 1 CD2 antigen cytoplasmic tail-binding protein 2 (CD2 cytoplasmic domain-binding protein 2) (CD2 tail-binding protein 2) (U5 snRNP 52K protein) (U5-52K) |
Synonyms | KIAA1178 |
Description | FUNCTION: Involved in pre-mRNA splicing as component of the U5 snRNP complex that is involved in spliceosome assembly. . |
Accessions | A0A0S2Z5J7 ENST00000569466.1 A0A024QZC1 ENST00000305596.8 O95400 |