CCL13 | OmnibusX

Name	Number of supported studies	Average coverage
macrophage	3 studies	23% ± 6%	Explore
fibroblast	3 studies	31% ± 7%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of CCL13 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	95%	515.62	547 / 578	84%	36.68	972 / 1155
skin	63%	205.61	1145 / 1809	61%	11.18	287 / 472
bladder	57%	202.33	12 / 21	66%	18.30	333 / 504
intestine	64%	610.66	615 / 966	53%	8.69	277 / 527
thymus	42%	50.72	277 / 653	67%	14.74	407 / 605
breast	67%	122.08	308 / 459	42%	6.08	470 / 1118
esophagus	53%	99.83	770 / 1445	44%	8.06	81 / 183
adipose	87%	313.12	1049 / 1204	0%	0	0 / 0
adrenal gland	75%	143.16	193 / 258	9%	1.50	21 / 230
stomach	31%	44.82	111 / 359	50%	6.24	143 / 286
pancreas	5%	3.78	15 / 328	75%	16.56	133 / 178
tonsil	0%	0	0 / 0	78%	12.60	35 / 45
uterus	16%	27.38	28 / 170	54%	9.66	246 / 459
lymph node	0%	0	0 / 0	62%	8.27	18 / 29
blood vessel	52%	123.63	693 / 1335	0%	0	0 / 0
kidney	22%	28.67	20 / 89	16%	1.55	145 / 901
prostate	33%	42.41	80 / 245	4%	0.21	22 / 502
ovary	4%	4.43	8 / 180	24%	3.28	103 / 430
heart	28%	37.27	243 / 861	0%	0	0 / 0
liver	1%	0.74	2 / 226	14%	1.42	57 / 406
muscle	5%	4.71	37 / 803	0%	0	0 / 0
brain	0%	0	0 / 2642	4%	0.98	30 / 705
eye	0%	0	0 / 0	4%	0.24	3 / 80
peripheral blood	1%	2.05	10 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006954	Biological process	inflammatory response
GO_0043547	Biological process	positive regulation of GTPase activity
GO_0007165	Biological process	signal transduction
GO_0006935	Biological process	chemotaxis
GO_0006874	Biological process	intracellular calcium ion homeostasis
GO_0007010	Biological process	cytoskeleton organization
GO_0007267	Biological process	cell-cell signaling
GO_0031640	Biological process	killing of cells of another organism
GO_0070098	Biological process	chemokine-mediated signaling pathway
GO_0030335	Biological process	positive regulation of cell migration
GO_0048245	Biological process	eosinophil chemotaxis
GO_0061844	Biological process	antimicrobial humoral immune response mediated by antimicrobial peptide
GO_0008360	Biological process	regulation of cell shape
GO_0005615	Cellular component	extracellular space
GO_0005576	Cellular component	extracellular region
GO_0008009	Molecular function	chemokine activity
GO_0048020	Molecular function	CCR chemokine receptor binding
GO_0005102	Molecular function	signaling receptor binding
GO_0005515	Molecular function	protein binding

Gene name	CCL13
Protein name	C-C motif chemokine 13 (CK-beta-10) (Monocyte chemoattractant protein 4) (Monocyte chemotactic protein 4) (MCP-4) (NCC-1) (Small-inducible cytokine A13) [Cleaved into: C-C motif chemokine 13, long chain; C-C motif chemokine 13, medium chain; C-C motif chemokine 13, short chain] CC-chemokine (Chemokine (C-C motif) ligand 13, isoform CRA_a) C-C motif chemokine ligand 13
Synonyms	NCC1 SCYA13 MCP4 hCG_29297
Description	FUNCTION: Chemotactic factor that attracts monocytes, lymphocytes, basophils and eosinophils, but not neutrophils. Signals through CCR2B and CCR3 receptors. Plays a role in the accumulation of leukocytes at both sides of allergic and non-allergic inflammation. May be involved in the recruitment of monocytes into the arterial wall during the disease process of atherosclerosis. May play a role in the monocyte attraction in tissues chronically exposed to exogenous pathogens.
Accessions	J3QLQ9 ENST00000577681.1 Q99616 ENST00000225844.7 O95690

CCL13 report