Name | Number of supported studies | Average coverage | |
---|---|---|---|
CD4-positive, alpha-beta T cell | 10 studies | 24% ± 7% | |
CD8-positive, alpha-beta T cell | 7 studies | 26% ± 9% | |
CD16-negative, CD56-bright natural killer cell, human | 6 studies | 22% ± 6% | |
mature NK T cell | 6 studies | 22% ± 4% | |
mucosal invariant T cell | 6 studies | 18% ± 1% | |
B cell | 5 studies | 22% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 5 studies | 22% ± 3% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 5 studies | 23% ± 6% | |
natural killer cell | 5 studies | 24% ± 7% | |
CD8-positive, alpha-beta memory T cell | 5 studies | 21% ± 3% | |
gamma-delta T cell | 5 studies | 20% ± 3% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 4 studies | 27% ± 6% | |
T cell | 4 studies | 20% ± 4% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 31% ± 11% | |
plasma cell | 3 studies | 26% ± 11% | |
effector memory CD4-positive, alpha-beta T cell | 3 studies | 25% ± 12% | |
mast cell | 3 studies | 20% ± 2% | |
CD4-positive, alpha-beta memory T cell | 3 studies | 20% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 6 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 272.44 | 574 / 578 | 81% | 7.05 | 931 / 1155 |
kidney | 73% | 80.65 | 65 / 89 | 71% | 4.72 | 644 / 901 |
prostate | 87% | 114.47 | 213 / 245 | 57% | 3.65 | 288 / 502 |
stomach | 85% | 105.80 | 306 / 359 | 58% | 3.73 | 165 / 286 |
breast | 64% | 44.21 | 295 / 459 | 68% | 5.31 | 756 / 1118 |
bladder | 76% | 141.48 | 16 / 21 | 52% | 4.65 | 263 / 504 |
intestine | 70% | 254.43 | 676 / 966 | 54% | 4.05 | 283 / 527 |
esophagus | 68% | 55.79 | 978 / 1445 | 46% | 3.61 | 84 / 183 |
peripheral blood | 100% | 5475.15 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 1820.10 | 241 / 241 | 0% | 0 | 0 / 0 |
uterus | 49% | 31.92 | 83 / 170 | 51% | 3.68 | 233 / 459 |
pancreas | 21% | 11.20 | 68 / 328 | 78% | 11.05 | 139 / 178 |
thymus | 51% | 67.72 | 334 / 653 | 47% | 6.18 | 285 / 605 |
lymph node | 0% | 0 | 0 / 0 | 97% | 31.70 | 28 / 29 |
adipose | 85% | 103.68 | 1023 / 1204 | 0% | 0 | 0 / 0 |
skin | 24% | 13.42 | 426 / 1809 | 61% | 6.87 | 289 / 472 |
tonsil | 0% | 0 | 0 / 0 | 82% | 9.66 | 37 / 45 |
liver | 52% | 29.45 | 118 / 226 | 24% | 1.38 | 98 / 406 |
adrenal gland | 39% | 19.09 | 100 / 258 | 8% | 0.23 | 18 / 230 |
brain | 14% | 7.60 | 365 / 2642 | 30% | 1.09 | 215 / 705 |
ovary | 8% | 4.74 | 14 / 180 | 30% | 1.23 | 127 / 430 |
blood vessel | 34% | 33.51 | 453 / 1335 | 0% | 0 | 0 / 0 |
heart | 28% | 14.67 | 240 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 11% | 0.68 | 9 / 80 |
muscle | 1% | 0.69 | 11 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | C16orf54 |
Protein name | Transmembrane protein C16orf54 |
Synonyms | UNQ9389/PRO34280 |
Description | |
Accessions | Q6UWD8 ENST00000329410.4 |