BORCS7 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	16 studies	26% ± 11%	Explore
fibroblast	14 studies	25% ± 10%	Explore
ciliated cell	11 studies	35% ± 14%	Explore
plasmacytoid dendritic cell	9 studies	22% ± 5%	Explore
endothelial cell of lymphatic vessel	8 studies	30% ± 10%	Explore
smooth muscle cell	7 studies	20% ± 5%	Explore
pericyte	7 studies	22% ± 6%	Explore
endothelial cell of vascular tree	7 studies	19% ± 2%	Explore
non-classical monocyte	6 studies	32% ± 15%	Explore
natural killer cell	5 studies	19% ± 4%	Explore
B cell	5 studies	23% ± 4%	Explore
capillary endothelial cell	5 studies	18% ± 4%	Explore
epithelial cell of proximal tubule	5 studies	19% ± 4%	Explore
connective tissue cell	5 studies	24% ± 7%	Explore
epithelial cell	5 studies	41% ± 19%	Explore
classical monocyte	4 studies	31% ± 10%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	18% ± 2%	Explore
endothelial cell of artery	4 studies	19% ± 4%	Explore
astrocyte	4 studies	24% ± 13%	Explore
basal cell	4 studies	28% ± 11%	Explore
pancreatic A cell	3 studies	27% ± 9%	Explore
CD16-negative, CD56-bright natural killer cell, human	3 studies	22% ± 7%	Explore
CD4-positive, alpha-beta T cell	3 studies	21% ± 5%	Explore
CD8-positive, alpha-beta T cell	3 studies	23% ± 5%	Explore
conventional dendritic cell	3 studies	35% ± 15%	Explore
myofibroblast cell	3 studies	23% ± 6%	Explore
amacrine cell	3 studies	34% ± 11%	Explore
Mueller cell	3 studies	24% ± 6%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	21% ± 6%	Explore
vein endothelial cell	3 studies	19% ± 3%	Explore
goblet cell	3 studies	21% ± 5%	Explore
intestinal crypt stem cell	3 studies	19% ± 1%	Explore
neuron	3 studies	26% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	5 studies	25% ± 6%	Explore
peripheral blood	4 studies	27% ± 8%	Explore
eye	4 studies	23% ± 5%	Explore
brain	4 studies	18% ± 1%	Explore
uterus	3 studies	23% ± 7%	Explore
intestine	3 studies	27% ± 11%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	5253.22	258 / 258	100%	54.57	230 / 230
liver	100%	2270.27	226 / 226	100%	44.85	406 / 406
pancreas	100%	877.89	328 / 328	100%	23.50	178 / 178
thymus	100%	3277.46	653 / 653	100%	62.30	605 / 605
brain	100%	1832.99	2640 / 2642	100%	40.87	705 / 705
prostate	100%	2073.78	245 / 245	99%	50.75	499 / 502
kidney	100%	2204.44	89 / 89	99%	33.61	895 / 901
breast	100%	1984.59	459 / 459	99%	34.38	1107 / 1118
lung	100%	1566.52	577 / 578	98%	19.83	1137 / 1155
esophagus	100%	1373.27	1445 / 1445	98%	16.30	179 / 183
bladder	100%	1432.38	21 / 21	98%	16.86	492 / 504
uterus	100%	1719.12	170 / 170	97%	16.71	446 / 459
ovary	100%	1631.71	180 / 180	97%	15.63	415 / 430
stomach	100%	1262.61	359 / 359	96%	17.57	274 / 286
intestine	100%	1511.10	966 / 966	94%	18.36	495 / 527
skin	100%	1209.03	1802 / 1809	85%	13.17	401 / 472
adipose	100%	1889.07	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1529.98	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	16.47	29 / 29
spleen	100%	1700.09	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	6.82	1 / 1
muscle	100%	1325.13	802 / 803	0%	0	0 / 0
heart	99%	1201.68	852 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	93%	11.07	42 / 45
eye	0%	0	0 / 0	81%	15.09	65 / 80
peripheral blood	51%	306.56	478 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0