Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 34% ± 14% | |
astrocyte | 13 studies | 37% ± 20% | |
oligodendrocyte | 11 studies | 37% ± 16% | |
fibroblast | 11 studies | 33% ± 13% | |
macrophage | 10 studies | 39% ± 17% | |
microglial cell | 9 studies | 42% ± 13% | |
adipocyte | 9 studies | 33% ± 12% | |
glutamatergic neuron | 8 studies | 43% ± 23% | |
oligodendrocyte precursor cell | 8 studies | 37% ± 19% | |
pericyte | 8 studies | 34% ± 16% | |
myeloid cell | 7 studies | 33% ± 17% | |
GABAergic neuron | 6 studies | 40% ± 21% | |
B cell | 6 studies | 26% ± 7% | |
epithelial cell | 6 studies | 34% ± 20% | |
endothelial cell of lymphatic vessel | 6 studies | 35% ± 14% | |
smooth muscle cell | 6 studies | 28% ± 7% | |
interneuron | 5 studies | 57% ± 23% | |
dendritic cell | 5 studies | 26% ± 5% | |
mast cell | 5 studies | 26% ± 9% | |
T cell | 5 studies | 26% ± 7% | |
monocyte | 5 studies | 38% ± 11% | |
type I pneumocyte | 5 studies | 27% ± 9% | |
type II pneumocyte | 5 studies | 30% ± 8% | |
neuron | 4 studies | 40% ± 18% | |
granule cell | 4 studies | 37% ± 18% | |
cardiac muscle cell | 4 studies | 24% ± 3% | |
mesothelial cell | 4 studies | 29% ± 8% | |
Mueller cell | 4 studies | 32% ± 13% | |
amacrine cell | 4 studies | 31% ± 12% | |
retina horizontal cell | 4 studies | 33% ± 12% | |
retinal rod cell | 4 studies | 27% ± 5% | |
club cell | 4 studies | 32% ± 9% | |
glial cell | 3 studies | 24% ± 8% | |
plasma cell | 3 studies | 31% ± 4% | |
CD4-positive, alpha-beta T cell | 3 studies | 25% ± 2% | |
CD8-positive, alpha-beta T cell | 3 studies | 22% ± 3% | |
GABAergic amacrine cell | 3 studies | 30% ± 12% | |
glycinergic amacrine cell | 3 studies | 30% ± 5% | |
retinal cone cell | 3 studies | 25% ± 11% | |
endothelial cell of vascular tree | 3 studies | 35% ± 19% | |
hepatocyte | 3 studies | 46% ± 17% | |
retinal pigment epithelial cell | 3 studies | 38% ± 25% | |
alveolar macrophage | 3 studies | 58% ± 13% | |
ciliated cell | 3 studies | 27% ± 9% | |
natural killer cell | 3 studies | 27% ± 4% | |
respiratory goblet cell | 3 studies | 33% ± 13% | |
lymphocyte | 3 studies | 41% ± 13% | |
basal cell | 3 studies | 43% ± 25% | |
leukocyte | 3 studies | 40% ± 9% | |
mucus secreting cell | 3 studies | 28% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1438.09 | 1445 / 1445 | 100% | 5.30 | 183 / 183 |
intestine | 100% | 1478.43 | 966 / 966 | 100% | 4.08 | 527 / 527 |
prostate | 100% | 1767.23 | 245 / 245 | 100% | 6.63 | 502 / 502 |
stomach | 100% | 1407.30 | 359 / 359 | 100% | 4.49 | 286 / 286 |
breast | 100% | 1672.53 | 459 / 459 | 100% | 6.00 | 1117 / 1118 |
thymus | 100% | 1914.87 | 653 / 653 | 100% | 6.68 | 604 / 605 |
brain | 100% | 1259.42 | 2636 / 2642 | 100% | 6.12 | 705 / 705 |
lung | 100% | 1591.74 | 578 / 578 | 99% | 4.95 | 1148 / 1155 |
skin | 100% | 1664.88 | 1809 / 1809 | 99% | 5.38 | 469 / 472 |
kidney | 100% | 1233.28 | 89 / 89 | 99% | 6.12 | 895 / 901 |
uterus | 100% | 2044.29 | 170 / 170 | 99% | 3.96 | 455 / 459 |
bladder | 100% | 1729.19 | 21 / 21 | 99% | 3.99 | 499 / 504 |
pancreas | 100% | 854.80 | 327 / 328 | 99% | 4.57 | 176 / 178 |
ovary | 100% | 2172.12 | 180 / 180 | 98% | 3.35 | 423 / 430 |
adrenal gland | 100% | 1517.23 | 258 / 258 | 97% | 4.93 | 224 / 230 |
liver | 100% | 688.13 | 226 / 226 | 93% | 3.08 | 378 / 406 |
adipose | 100% | 1480.01 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1643.50 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 5.00 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 4.75 | 29 / 29 |
spleen | 100% | 1302.59 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 4.54 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.44 | 1 / 1 |
muscle | 100% | 1328.55 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 781.37 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 825.81 | 852 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006890 | Biological process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
GO_0006897 | Biological process | endocytosis |
GO_0045332 | Biological process | phospholipid translocation |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0005768 | Cellular component | endosome |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005886 | Cellular component | plasma membrane |
GO_0005524 | Molecular function | ATP binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0000287 | Molecular function | magnesium ion binding |
GO_0140326 | Molecular function | ATPase-coupled intramembrane lipid transporter activity |
Gene name | ATP9B |
Protein name | Probable phospholipid-transporting ATPase IIB (EC 7.6.2.1) (ATPase class II type 9B) ATPase phospholipid transporting 9B (putative) ATPase phospholipid transporting 9B (putative) (cDNA FLJ61123, highly similar to Homo sapiens ATPase, Class II, type 9B (ATP9B), mRNA) ATP9B protein Probable phospholipid-transporting ATPase IIB |
Synonyms | ATPIIB HUSSY-20 NEO1L |
Description | |
Accessions | ENST00000588921.1 ENST00000587919.1 O43861 ENST00000588895.1 ENST00000587878.1 ENST00000426216.6 [O43861-1] K7EJS3 K7ERE0 ENST00000589732.1 ENST00000633385.1 ENST00000633480.1 K7EQQ5 ENST00000590477.5 A0A0G2JNU9 ENST00000633932.1 ENST00000619535.1 B4DJ94 K7EJP9 K7EJG1 K7EQ39 K7EPH4 ENST00000586366.5 ENST00000589326.5 K7EL57 Q7Z6L4 ENST00000588600.1 ENST00000633900.1 ENST00000633276.1 K7EII3 ENST00000586672.5 A0A0J9YYD2 ENST00000586722.5 ENST00000307671.12 [O43861-2] ENST00000632485.1 K7ES39 |